Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1137 ATGGGAAACAAAATCCCAAATGAATCAGAGCAACAAAACTACCCATTGATACAGTCAACTCCATCACAACCACAATTTCAACCAAACACAGACTCTTTAATCCAACAAACATGTTCCGAATCAAACAAACTATGGCATATTGCCGCCCCTTCCATCTTCAGCCGTCTCACCATGTTCTCCATCACAGTCGTCACTCAATCTTTCGCCGGCCACCTCAACGATCTCGACCTCGCCGCCATTTCCATCTCCTGCACCCTCCTCATCTCCATCACTTTCGGTTTCTTGCTTGGAATGGCGAGTGCTCTTGAGACCCTTTGCGGCCAAGCTTACGGCGCAGGACAAAACCACATGTTGGGTGTTTATTTACAACGCTCTTGGGTTGTTCTTTTCTTGTCTTCAATTTTGTTGCTACCCATGTTTGTGTTCGCCACGCCTATGTTGAAGTTCATAGGACAACCCGTTGAGGTTGCGGAGCAAGCGGGTTTGGTTGCGATTTGGTTGATTCCGTTTCACTTGAGTTTCCCATTTCAATTCACTCTGCAAAGATTCTTGCAGTGTCAGTTGAAAACTGGTATTATAGCTTGGGTTTCTGGAGGAGCACTTGTGATTCATGTGATATTGAGTTGGGTGTTTGTTTATAAGATGAGAGTTGGGATTGTTGGGATTGCTCTTACTATTGATTTCTCTTGGTGGGTCTCGGTTTTGGGAATGCTTTGTTATACACTCTTTGGTGGCTGTTCATGTTCTTGGACCGGTTTTTCTGTTGAAGCTTTTGTTGGTCTTTGGGATTTCTTTAAACTCTCTTTGGCTTCTGGTGTCATGCTTGCGTTAGAGAATTTCTATTACAGATTGTTGCTTATAATGTCTGGTTATATGTACAACTCTGATGTTGCAATTGACGCTCTTTCGGTTTGTGTAACTATTTATGGTTGGGAATCCATGATACCGCTTGGTTTTTTAGCTGCAACCGGGGTACGAGTTGCAAACGAGCTTGGCGCAGGCAATGCAAAAGGGGCGAAATTTGCGACAATGGTTTCAGTTGTAAATACAGTATTAGTGGGTTTCGTATTTTGGTTGATAATCGTGACTTTTAATGAGAAGCTTGCTTTGATCTTTACATCAAGTTTATCTGTAATCCAAATGGTTCATGAACTATCATTCTTGTTGGCTTTTACCATTCTTCTTAATTGCGTTCAACCCGTTCTTTCAGGTGTAGCCGTTGGATCTGGTCGGCAAGTAGTAGTGGCTTATATAAACATTGGCAGCTATTACTTGGTCGGAATACCTTTCGGGATTCTCCTAGGCTGGTTGCTACCGTCCGGCATTGTGGGTATGTGGATTGGAATGATGAGCGGAACGGTGGTTCAAACATTGATCTTGGCCATTATCACGTCGAGATATGATTGGGAAAGAGAGGTACGGAAAGCACAGATTCTTGTTAAGGACGACGAAACATCCAACCAATAA 1467 0.4322 MGNKIPNESEQQNYPLIQSTPSQPQFQPNTDSLIQQTCSESNKLWHIAAPSIFSRLTMFSITVVTQSFAGHLNDLDLAAISISCTLLISITFGFLLGMASALETLCGQAYGAGQNHMLGVYLQRSWVVLFLSSILLLPMFVFATPMLKFIGQPVEVAEQAGLVAIWLIPFHLSFPFQFTLQRFLQCQLKTGIIAWVSGGALVIHVILSWVFVYKMRVGIVGIALTIDFSWWVSVLGMLCYTLFGGCSCSWTGFSVEAFVGLWDFFKLSLASGVMLALENFYYRLLLIMSGYMYNSDVAIDALSVCVTIYGWESMIPLGFLAATGVRVANELGAGNAKGAKFATMVSVVNTVLVGFVFWLIIVTFNEKLALIFTSSLSVIQMVHELSFLLAFTILLNCVQPVLSGVAVGSGRQVVVAYINIGSYYLVGIPFGILLGWLLPSGIVGMWIGMMSGTVVQTLILAIITSRYDWEREVRKAQILVKDDETSNQ* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1137 488 PANTHER PROTEIN DETOXIFICATION 24 477 - -
Psa5g1137 488 PANTHER MULTIDRUG RESISTANCE PROTEIN 24 477 - -
Psa5g1137 488 TIGRFAM matE: MATE efflux family protein 50 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1137 488 Pfam MatE 50 210 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1137 488 Pfam MatE 272 432 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1137 488 CDD MATE_eukaryotic 40 475 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1137 Psa-Chr5 88318385 88321618 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1137 K03327 - gmx:100814869 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1137 5 88318385 88321618 Psa5g1137 5 88318385 88321618 ECH