Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1136 ATGGATAGCATAGATAGAGATAATGATAATAATGACACTCTTGTCCAATCTCTGTTGCCAAAAGAAATTTCATCCATTCAACCTAAGGAAGAGGAGGAAGAAGAAGTATTTGGGAAGAAGCTTTGGATTGAAACTAAGAAACTATGGGTGATAGTGGGTCCCGCTATCTTCAGCCGCATCGCGTCATTCACCATGAACGTCGTTAGTCAAGCTTTCGCCGTGGGTCCCGCTATCTTCAGCCGCATCGCGTCATTCACCATGAACGTCGTTAGTCAAGCTTTCGCCGGTCACTTAGGAGAAGTTCAACTCGCCTCCATCACCATCGCCAACACCGTCATCGTTGGCTTCAACTTCGGCCTCCTCTTGGGAATGGCAAGTGCATTGGAGACACTTTGTGGACAAGCGTTTGGTGCAAAACGACATAACATGTTAGGAATATATATGCAAAGATCTTGGATTGTTCTATTCGTATGTTGTTTTCTTTTGCTGCCGTTTTATGTCTTTGCTACTCCATTTCTCAAACTTATAGGACAACCCGACGACGTGGCGGAATCGAGTGGTATTGTAGCTATATGGCTTATACCTTTGCATTTCAGTTTTGCCTTTCAGTTTCCTCTTGCGAGGTTTTTGCAGTGCCAGCTGAAAACAGGTGTGATTGCATGGGTTTCTCTGTTGGGTTTGGTGGTGAATGTTGTATTGAGTTGGTTGTTGGTTTATGTTTGGGAGTTTGGAGTTATTGGTGCTGCTATTGCTTTGGATGTTTCATGGTGGGTACTGGTTTTTGGAATGTTTGGTTACACAGTTTGTGGTGGCTGTCCTTTAACTTGGAATGGTTTTTCAATGGAAGCATTTTCTGGTCTTTGGGATTTCTTCAAACTGTCATTAGCTTCGGGGGTGATGCTTTGTTTAGAGAATTGGTATTACAGGATACTTTTGCTTATGACTGGCCAGTTAGAAAATGCAACGGTTGCGGTTGATGCATTGTCTGTATGTATGACTATCAATGGATGGGAAATGATGATTCCTCTTGCTTTCTTTGCTGGTACCGGGGTGCGGGTGGCGAACGAATTTGGAGCAGGAAAAGGAAAGTCAGCAAAATTTGCAATGCAAGTATCAGTGATACAATCAACTGTGATTGGATTAGTCTTCTGTGTTCTCATAATGATATTTCAGAGACAATTTGCATATATTTTCACCTCAAGCCCTTCTGTTCTTCAAGCTGTTAACGATATGTCAATCCTCTTAGCAGCCACCATTCTTCTCAATAGCGTTCAACCTGTTCTATCGGGTGTAGCCGTTGGTTCGGGTTGGCAAGTATTTGTAGCATACATAAATATTGGATGCTACTATTTAATTGGACTCCCACTTGGAATTATCATGGGATGGGTCTTCAACACTGGTGTTGAAGGCATATGGGGTGGGATGATATTTGGTGGTACAACAATCCAAACTTTGATACTCATCATAATTACAGTTCGGTGTGATTGGGAAAAGGAGGTAGAGAAGGCTGACTCACGTGTAAACAAATGGTCTGTAATTAAGTCTAATGATCAGCTGCAGATCACAGATTAA 1572 0.4237 MDSIDRDNDNNDTLVQSLLPKEISSIQPKEEEEEEVFGKKLWIETKKLWVIVGPAIFSRIASFTMNVVSQAFAVGPAIFSRIASFTMNVVSQAFAGHLGEVQLASITIANTVIVGFNFGLLLGMASALETLCGQAFGAKRHNMLGIYMQRSWIVLFVCCFLLLPFYVFATPFLKLIGQPDDVAESSGIVAIWLIPLHFSFAFQFPLARFLQCQLKTGVIAWVSLLGLVVNVVLSWLLVYVWEFGVIGAAIALDVSWWVLVFGMFGYTVCGGCPLTWNGFSMEAFSGLWDFFKLSLASGVMLCLENWYYRILLLMTGQLENATVAVDALSVCMTINGWEMMIPLAFFAGTGVRVANEFGAGKGKSAKFAMQVSVIQSTVIGLVFCVLIMIFQRQFAYIFTSSPSVLQAVNDMSILLAATILLNSVQPVLSGVAVGSGWQVFVAYINIGCYYLIGLPLGIIMGWVFNTGVEGIWGGMIFGGTTIQTLILIIITVRCDWEKEVEKADSRVNKWSVIKSNDQLQITD* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1136 523 CDD MATE_eukaryotic 75 502 IPR045069 GO:0042910|GO:1990961
Psa5g1136 523 PANTHER PROTEIN DETOXIFICATION 27 73 - -
Psa5g1136 523 PANTHER PROTEIN DETOXIFICATION 74 507 - -
Psa5g1136 523 Pfam MatE 76 236 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1136 523 Pfam MatE 298 458 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1136 523 TIGRFAM matE: MATE efflux family protein 76 472 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g1136 523 PANTHER MULTIDRUG RESISTANCE PROTEIN 27 73 - -
Psa5g1136 523 PANTHER MULTIDRUG RESISTANCE PROTEIN 74 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1136 Psa-Chr5 88244724 88258777 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1136 K03327 - gmx:100500204 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1136 5 88244724 88258777 Psa5g1136 5 88244724 88258777 ECH