Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1135 ATGATTCTCATTAATTCTCAAGGATCCATCAAAATGATTCAAAGAACTCTCCATTTTCCAAGTTTAAGAAAATTCCTTCTCCAGCCAGGTTATAATTATCTCTCTTCTTCCAAGATAGGGGCTTACAATGGTTATACATCTCAGCCGTCACCTCTTCCGGTTCCGAGCGATGAAGATGAATATGCTAATGTTGATTGGGACAGTCTTGGATTTGGATTGATGCCAACTGATTTCATGTATGTGACAAAATGTGATGCGGGCCAGAGTTTTGGAGATGGGCAGATCAATCGGTATGGAAACATTGAACTTAGTCCATCAGCAGGGGTCCTAAATTATGGCCAGGGATTATTTGAAGGCACAAAAGCATACAGAAAGGAAAATGGGAAGCTGCTGCTGTTCCGTCCAGAAGAAAATGCAATTCGCATGATGATCGGCGCGGAAAGAATGTGCATGATACCTCCTTCCATTGATCAATTCGTCGATGCTTTGAAACGAACTGCGCTCGCAAATAAGCGTTGGGTTCCTCCGCCAGGTAAAGGATCCTTGTACCTTAGGCCACTGCTCTTAGGAAGTGGTCCGGTTCTTGGTTTGGCTCCTGCTCCTGAGTACACATTCCTCATATATGCTTCCCCGGTTCGCAACTATTTCAAGGAAGGTTCGGCTCCGCTCAACTTGTACGTAGAAGAGGATTTTGACCGTGCTTCACGTCGCGGCACTGGAGGCGTTAAAACCATTTCCAATTATGCACCTGTCTTGATGGCACAAAATATAGCCAAGAGTCGAGGATTTTCGGATGTTTTATACCTTGATTCGGAGAGCAAGAAAAATCTGGAGGAAGTTTCTTCTTGTAACATTTTTATTGCCAAGGGAAAAAAGATTTCAACACCTGCTATCAACGGAACCATACTTCCAGGAATCACCAGAAAAAGTGTGATTGAAATCGCGACTGATTTGGGTTATCAGGTGGAAGAACGCGTTGTTGCGGTCGATGAATTGACCGAGGCCGATGAGGTTTTCTGTTCAGGAACTGCTGTTGGTGTTGCTCCTGTGGGGAGTATCACATACAGGAATAGAAGGGTGGACTATAAAACAGGTTCTGGGTCCATTTGTAAAGAACTGTGCAAAACCATCTTAGGAATACAGACTGGTAGTATTGAAGATAAGAAGGGATGGATAGTTGAATTTGATTAA 1191 0.4358 MILINSQGSIKMIQRTLHFPSLRKFLLQPGYNYLSSSKIGAYNGYTSQPSPLPVPSDEDEYANVDWDSLGFGLMPTDFMYVTKCDAGQSFGDGQINRYGNIELSPSAGVLNYGQGLFEGTKAYRKENGKLLLFRPEENAIRMMIGAERMCMIPPSIDQFVDALKRTALANKRWVPPPGKGSLYLRPLLLGSGPVLGLAPAPEYTFLIYASPVRNYFKEGSAPLNLYVEEDFDRASRRGTGGVKTISNYAPVLMAQNIAKSRGFSDVLYLDSESKKNLEEVSSCNIFIAKGKKISTPAINGTILPGITRKSVIEIATDLGYQVEERVVAVDELTEADEVFCSGTAVGVAPVGSITYRNRRVDYKTGSGSICKELCKTILGIQTGSIEDKKGWIVEFD* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1135 396 Gene3D - 45 223 IPR043131 -
Psa5g1135 396 TIGRFAM ilvE_II: branched-chain amino acid aminotransferase 92 394 IPR005786 GO:0004084|GO:0009081
Psa5g1135 396 ProSitePatterns Aminotransferases class-IV signature. 279 308 IPR018300 GO:0003824
Psa5g1135 396 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 59 392 IPR036038 GO:0003824
Psa5g1135 396 Pfam Amino-transferase class IV 115 353 IPR001544 GO:0003824
Psa5g1135 396 CDD BCAT_beta_family 102 383 IPR033939 GO:0004084|GO:0009081
Psa5g1135 396 PIRSF BCAT1 48 396 IPR005786 GO:0004084|GO:0009081
Psa5g1135 396 PANTHER BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 33 395 - -
Psa5g1135 396 Gene3D - 224 395 IPR043132 -
Psa5g1135 396 PANTHER AMINO ACID AMINOTRANSFERASE 33 395 IPR005786 GO:0004084|GO:0009081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1135 Psa-Chr5 88192757 88197066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1135 K00826 - gmx:100782644 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1135 5 88192757 88197066 Psa5g1135 5 88192757 88197066 ECH