Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1132 ATGGCTGCTCGAAATCTTCAAGCATCAAATCCTATGTTATGGGTCACAGATCAAGCTCCCGAACCACGCTTGACTCAATTAGACAAGCTTGAGAAAATGTTCCCTTTCTTGACAGATATACTTAAAAAGAAATTTACGGTTCAACTGGTGACTGGTTACTTGCCAAGTGTGATTTTGGTTTTATTTTTAATTGGTGTTGGACCAGTGATGATGTTACTTTCAGCAGTGGAGGGGCCAATTTCCCGTAGTTGTAGGAAGAGAAGTGCATGCTACAAAGTTTTGTATTTCACTATTTGGAATGTTTTTTTTGTCAATGTTTTTGCCGGGTCTGTTATCAGTCAACTCTCAGTGTTTACAAGTATAACAGAACTACCTGCCCAACTTGCAAAGGCAGTTCCAACACAGGCTACATTCTTCACAACATATGTTTTATCATCAGGGTGGGCAAGTCTAGCTTTTGAGATTATACAACCGTTTCCTCTTTTTTGTAACATATTCCAAAGACTAGTACTCTGCTCTGGGCAAGATTCATATAATGGCACCCTAACTTTTCCTTACCATACAGAAGTTCCGAGAATATTGCTATTTGGATTTCTAGGGTTCGCATGTTCTATTCTTGCGCCCCTGATACTACCATTTTTACTGTTCTACTTTTTCCTTGCATACATCGTATACCGTAACCAGATTCTCAATGTTTATATTACAAAATACGATGGCGGCGGACAATTATGGCCTATTGCCTTCAACACGACGATCTTTTCATTACTTGTGGCACAAGTTATTGCATTAGGGGTGTTTGGACTAAAACAATCAACAATTGCATCTGGATTTACCATTCCATTGTTGATTGGTACTGTTCTATTTAACCAATATTGTAGGCAACGGTTTCTTCCAGTATTTAAGAACAATGCAGCACAGGTTTTTATTGACATGGATCACAGAGATGCAAATTGTAGAAGGATGGAAGAGATTTATGATCAATTGCATTCAGCATACTCCCAATTCGGCACTAGCTCTACTCAATCTGGATGTTTTGGTTATCCAGGGCAGAGAGAACATGCTCAGAGTCATCCGATTCCAGGGCACAAAGAACATGTTCAGAGTCGTCCGATTCCATTTGATTTGGAGAGAGGCAAAGAATCAATCAAACCAGATATATCATGGGCAATTCATCGATAG 1179 0.3936 MAARNLQASNPMLWVTDQAPEPRLTQLDKLEKMFPFLTDILKKKFTVQLVTGYLPSVILVLFLIGVGPVMMLLSAVEGPISRSCRKRSACYKVLYFTIWNVFFVNVFAGSVISQLSVFTSITELPAQLAKAVPTQATFFTTYVLSSGWASLAFEIIQPFPLFCNIFQRLVLCSGQDSYNGTLTFPYHTEVPRILLFGFLGFACSILAPLILPFLLFYFFLAYIVYRNQILNVYITKYDGGGQLWPIAFNTTIFSLLVAQVIALGVFGLKQSTIASGFTIPLLIGTVLFNQYCRQRFLPVFKNNAAQVFIDMDHRDANCRRMEEIYDQLHSAYSQFGTSSTQSGCFGYPGQREHAQSHPIPGHKEHVQSRPIPFDLERGKESIKPDISWAIHR* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1132 392 Pfam Calcium-dependent channel, 7TM region, putative phosphate 24 266 IPR003864 GO:0016020
Psa5g1132 392 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 24 345 IPR045122 GO:0005227
Psa5g1132 392 PANTHER CSC1-LIKE PROTEIN RXW8 24 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1132 Psa-Chr5 87915564 87918652 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1132 K21989 - gmx:100789875 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1132 5 87915564 87918652 Psa5g1132 5 87915564 87918652 ECH