Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1126 ATGAAGCTTCATCCTTTGAGCCAAATCAACCACTCTCAAAAAACCGCTTTTCTCGGCGTTTTCCTCTCCGTCTTACCATTTTTCTCTCCCAATCTCTTCCAACCTCTCGCTCGTGCTTCGCCTTCCATGTTCTCCGAATGGATCGCTCCTAAACCTAGGCATGTTACATTGCTACAGGGTGCTCTGCAACACAAAACTTCTCTTCAAGTACAAGCTAATCTCTGGTCTCCCCTTCCTTTCCAAGGATGGAAACCTTGTACCATACATCCAAAATCACCTTCGCTACCTGAAAAGTCTCAGGGTTATATTCAAGTTTTTCTCGATGGAGGATTGAACCAGCAGAAGATGGGGATATGTGATGCAGTAGCTGTTGCTAAGATTTTGAATGCAACGTTGGTGGTCCCGCATTTTGAAGTGAATCCCGTTTGGCAAGATTCAAGTTCATTTGCAGATATATTTGATGTGGATCACTTCATTGATGTTCTCCGTGATGAAGTATCTATAGTGAAAGAGCTTCCCAGTGAGCATTCTTGGAGCACAAGAGAGTACTATGCCACGGGCATCAGGGATACTAGAATTAAAACAGCACCAGTTCAAGCTACTGCAGAGTGGTATATAGAAAATGTATTGCCGATACTTCAGAGTTATGGTGTTGCTGCTATTGCACCGTTCTCTCATCGCTTGACATTCAACGGCTTACCATCTGACATCCAGCGTCTCCGTTGTAAGGTCAACTTTGAAGCATTGAACTTTGTTCCACATCTACAGGAATTAGGAAGTATCATTGTTCAGCGCCTTCGCTACAATGCTACTGTCACCCAAGATGAAGCAAATGACTATTTGCTAGAGGAAACCAATAAGCTAGGAAAACGACAAAGCGGGAAGTTTGTTGTGTTGCATCTGCGTTTTGATAAAGATATGGCTGCCCATTCAGCCTGTGATTTTGGTGGGGGTAAAGCTGAGAAACTTGCTCTAGCTAAATACAGGCAGGTGCTTTGGCAGGGAAGAGTGTTGAATTCTCAATTCACAGATGAAGAGTTGAGAAATCAGGGGCGTTGCCCACTGACTCCAGAAGAGATTGGATTGCTCCTAGCTGCTTTGGGGTTCAACAACAAAACACGGCTTTATCTTGCTTCCCACAAGGTTTATGGTGGAAAAGCTAGGTTGGAAACTTTAAGCAAGTTATTTCCTTTTATGGAAGATAAGAAGAGTCTAGCCTCTGAAGAGAAACTTGCAAAGGTTAAAGGAAAGGCATCACTATTAGCCGCTATTGATTATTATGTGAGCATGCACAGTGACATCTTCATTTCTGCTTCTCCAGGCAATATGCACAATGCTCTGGTGGCGCACCGTGCTTATAAGAATATGAAGACTATCAGACCAAGCATGGGACTTTTGGGCCAGCTATTTCAAAACAAGAGCATGAGCTGGCCAGAATTTCATCATGCAGTTCTTGATGGGCATAAGAACAGACAAGGGCAGATAAGATTAAGAAAGGAGAAGCAATCAATATACACCTATCCAGCTCCTGATTGCATGTGTAAAGCTGATTGA 1554 0.4331 MKLHPLSQINHSQKTAFLGVFLSVLPFFSPNLFQPLARASPSMFSEWIAPKPRHVTLLQGALQHKTSLQVQANLWSPLPFQGWKPCTIHPKSPSLPEKSQGYIQVFLDGGLNQQKMGICDAVAVAKILNATLVVPHFEVNPVWQDSSSFADIFDVDHFIDVLRDEVSIVKELPSEHSWSTREYYATGIRDTRIKTAPVQATAEWYIENVLPILQSYGVAAIAPFSHRLTFNGLPSDIQRLRCKVNFEALNFVPHLQELGSIIVQRLRYNATVTQDEANDYLLEETNKLGKRQSGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVLWQGRVLNSQFTDEELRNQGRCPLTPEEIGLLLAALGFNNKTRLYLASHKVYGGKARLETLSKLFPFMEDKKSLASEEKLAKVKGKASLLAAIDYYVSMHSDIFISASPGNMHNALVAHRAYKNMKTIRPSMGLLGQLFQNKSMSWPEFHHAVLDGHKNRQGQIRLRKEKQSIYTYPAPDCMCKAD* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1126 517 PIRSF UCP009360 2 517 IPR024709 -
Psa5g1126 517 Pfam GDP-fucose protein O-fucosyltransferase 102 453 IPR019378 -
Psa5g1126 517 CDD O-FucT_plant 102 459 IPR024709 -
Psa5g1126 517 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 3 516 - -
Psa5g1126 517 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 3 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1126 Psa-Chr5 87652809 87657718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1126 74 517 Miscellaneous Gene Families AT1G22460 33.190 2.44e-85 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1126 - - mtr:MTR_3g100310 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1126 5 87652809 87657718 Psa5g1126 5 87652809 87657718 ECH