Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1098 ATGAACGGGTCTCCGCGAAGAGATCTACAAGTCTTCGATTTCAATGAAGACGATGCGATTAACTCCGATAAACTCATCTTCAACAAATTCAGCAAAATCCCTATCCACGATTCTCTCGCTCACGATGGCCAGATCAAAGAGGTTGGTGTCAAGAATGTCCCCAGTAATCCTTGTGTTGGCGTTGATGTAGTTGGGGGTATTTCAGAGATGGAAACAGGTTGTTCAAAACCCTCTTTCAAAACAATGGAAGATACATTTGATAGCAAAGTGAAGAATTCCGAGTTAGGCACTGACAAACAAACAAATTCCATTAGTCAGGAAAATCACTGTCATTTTAAAATAAACGTTGATTACTATGACGGACAAAAGAATAGGGATACAAGTGGTGGTGCATCTACACCTGGGACGAGTCAGATTGGTCCTTCAGGATCTCCATCCAGTAAAGAATCTGTTGATGTTAGTTCTGATGCTGATGATTGCATGAACCATGAGAGTGCTCCAACAAGTGCTGCTTCTGATATTGTGGAGAATGGAGTATTTCATCTTTCACTGAATGGTTGTGGATTGGATGGTGCACACACTTCTGACATGGATGACACGTCCGAAGTTGTTCTCCGTCCTGATTATATAGTTTACCAGGATAATTATTATATGGGGCCAATGTTAACTTTTTCACATTGCTGCATCAAGATCAATGTTTCAACTGCAAGTATGAAGCAAGGGGCCTTTGATCTCGAATGGGGACTTGATGATCTTATTGATATTAAGTGTCAGTTGTTTCAAAGTAGTGGAACGGTCATCATAAAGATTAATGTAATATCAAGGAATGCAAATCAGTTAGATCATTTAAGCGACACTTCAGGCATTGAGGAGTTGGAGATTGCAGTTGTTGATTCCAATTGGTCCCTGATACATAAAAAGATCACAACTCTTAATGTAAAATACTTAGCTATTTGGAACGTCATGCTTAATATGGATGTAGAAGATAATGAAACTAAATCGGGTGGATCAAGATGCTACTTTCCTAATTTTGAGGAGCCTTTTGATGAAGTCATATATCCTGAAGGGGATCCAGATGCTGTTTCTCTAAGCAAGAGAGACTTTGATCTATTACAACCTGACACATTCATTAATGACACAATAATTGACTTCTACATCCAGTATCTGAAGAATCAGATACAAGAGGAGGAGAAACCTAGATTTCATTTTTTTAATAGTTTTTTCTTTCGAAAGCTGGTTGATTTGGACAAAAATCCATCTAGTGCTTCGGATGGAAAAGCAGCATTTCTACGTGTTCGTAAATGGACAAGAAAAATAAATTTATTTGAAAAGGATTACATCTTCATTCCTGTGAATTTCAATCTTCATTGGAGCTTAATTGTCATATGTCATCCTGGTGAAGTGGTTAATTTCAATGATAAAGAGTTGGCTAACTCGCTTAGAGTACCCTGTATATTACATATGGATTCTATAAAAGGAAATCATAGCGGTCTGAAAAACCTGCTGCAGAGTTACTTGTGGGAAGAATGGAAAGAGAGACATAAAGATGCACCGGAAGAAGACCTTTCAGCATTATTTTCAAATTTGCGTTTTCTCCCCCTTGCGTTGCCACAGCAGGATAACTCATATGATTGTGGCCTCTTTCTGCTGCACTACCTAGAGCTCTTCCTTGCCGAAGCTCCTCTTACTTTCAATCCATTCAAACTAACCAAGTTTTCCAATTTTCTCAACGCGGATTGGTTTCTGCCTGCTGAGGCATATCTCAAGCGAACACTGATCCAGAAGTTGATTTCCGAACTTGTGGAAAACCATGGTTCACGTGAAATCTCGTCCTCGGACTGTAGTGATGACCCCCAGTACATAGAAAATAATGAAAACAGAATCTGCGTTGAGCATCCTGAAGTCAATAGGGAGTCAAAAACTTCCTTTGATGGACAGGGAATAGAAATGACTCTATTGTCTGGATCATCGTCTTTGGATCCTCAATCTTTAAACAACTCGGGCATGGTTCTTAAGGATCTCTTTGAGCCAGGTGCTTCAGCCGCAACATCGGCACAGTGTCATTCTTTTGACCAGCGATCGTCTGATTATCGTTTCAATAATTCGATATTTTCGATGGAGGAAAACTCCGATCTTGGGGAACAATTTATGTACTTAGCAACAGATACCAACTTAGCCACAGATACCAGCTTCCAGCAAGTAGCTGAAGTTACACCTCAAGCATGTTCTTTGCCTTACCTTCCTAGGGATTGTGGAAATGGGACTAATCACATACTAGAAATCTCTCTGCAAGAGGATGTGTCATCTCCCAGCAGTTCCGAAGATACAGAAGCCATAGGGGTCACTGAAAACTGTCCAGACTATGGGAATGAACCCATAACATCTAATGAGGCAGAACAAGGTGAAAAAATTTGTTCACCCATAGAAAATACCGAGCATTTTATAGATATCTGTGGTTCTGCTAGCAACAATTTATCAATACCCTCGGTCATGGGAATTTCTAAAGACTCCATGAATTGTGATGGTTACAAGAATGGAGATATTCACTCTCCCTGTCAGGAAGCTCCCACAATAGGGTTGCATCAAGTTTCTGAAGCAGTAGATGAGGAGGCCGCATGTGATGCTGGTCAGATGATTGATGATATGGGAGCTGATATTTGTGAGGAACAAGCTGCAAAGAGGAGGCGGGTTATGCCTCCGCAATGA 2706 0.4039 MNGSPRRDLQVFDFNEDDAINSDKLIFNKFSKIPIHDSLAHDGQIKEVGVKNVPSNPCVGVDVVGGISEMETGCSKPSFKTMEDTFDSKVKNSELGTDKQTNSISQENHCHFKINVDYYDGQKNRDTSGGASTPGTSQIGPSGSPSSKESVDVSSDADDCMNHESAPTSAASDIVENGVFHLSLNGCGLDGAHTSDMDDTSEVVLRPDYIVYQDNYYMGPMLTFSHCCIKINVSTASMKQGAFDLEWGLDDLIDIKCQLFQSSGTVIIKINVISRNANQLDHLSDTSGIEELEIAVVDSNWSLIHKKITTLNVKYLAIWNVMLNMDVEDNETKSGGSRCYFPNFEEPFDEVIYPEGDPDAVSLSKRDFDLLQPDTFINDTIIDFYIQYLKNQIQEEEKPRFHFFNSFFFRKLVDLDKNPSSASDGKAAFLRVRKWTRKINLFEKDYIFIPVNFNLHWSLIVICHPGEVVNFNDKELANSLRVPCILHMDSIKGNHSGLKNLLQSYLWEEWKERHKDAPEEDLSALFSNLRFLPLALPQQDNSYDCGLFLLHYLELFLAEAPLTFNPFKLTKFSNFLNADWFLPAEAYLKRTLIQKLISELVENHGSREISSSDCSDDPQYIENNENRICVEHPEVNRESKTSFDGQGIEMTLLSGSSSLDPQSLNNSGMVLKDLFEPGASAATSAQCHSFDQRSSDYRFNNSIFSMEENSDLGEQFMYLATDTNLATDTSFQQVAEVTPQACSLPYLPRDCGNGTNHILEISLQEDVSSPSSSEDTEAIGVTENCPDYGNEPITSNEAEQGEKICSPIENTEHFIDICGSASNNLSIPSVMGISKDSMNCDGYKNGDIHSPCQEAPTIGLHQVSEAVDEEAACDAGQMIDDMGADICEEQAAKRRRVMPPQ* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1098 901 MobiDBLite consensus disorder prediction 126 169 - -
Psa5g1098 901 ProSiteProfiles Ubiquitin-like protease family profile. 361 556 IPR003653 GO:0006508|GO:0008234
Psa5g1098 901 SUPERFAMILY Cysteine proteinases 353 600 IPR038765 -
Psa5g1098 901 MobiDBLite consensus disorder prediction 126 151 - -
Psa5g1098 901 Gene3D - 353 598 - -
Psa5g1098 901 Pfam Ulp1 protease family, C-terminal catalytic domain 376 570 IPR003653 GO:0006508|GO:0008234
Psa5g1098 901 Gene3D - 401 533 - -
Psa5g1098 901 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 2B-RELATED 8 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1098 Psa-Chr5 85709786 85719166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1098 K08596 - gmx:100800444 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1098 5 85709786 85719166 Psa5g1098 5 85709786 85719166 ECH