Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1083 ATGAACCCTAAATTGGCTACAACCTTAATACTTAGCTATGTATTTTACACATGCAAAAGCAACTCCATTGATCCATGTGCATCTCAACAAGATGAGTCTGATCTTAAGGTATCTCCCATGTACGGGAAATGCTCACCAATCAACTCACTAAAAACAAACTCATGGGATGATAGAGTCATAAATATGGCCTCCAAAGATTTAGACCGAATTACTTACCTATCCACATTAGTAGCCAAAAAATCGGCCTTTTCAGCTTCAACACCAATCGCTTCGGGTCAAGCTTTCAACATTAACAACTATGTTGTACGTGTCAAAATCGGAACACCAGGTCAACTCCTCTCTATGGTTTTTGACACAAGTTCCGACGAAGCTTTTATCCCTTCTTTGGGATGCACTGGTTGCTCCGCACCAAAATTCTCTCCAAAATCCTCCACTAGTTATGTCCCATTGAAGTGTTTCACTCCACAATGTGGTCTAACCCGTGGGCATTTATGCTCAGTCAAAAGCTCTAATTTGTGTTCCTTCAACCAATCTTACGCAGATTCTTCTTTCTCTGCTACACTTGCTCAAGATTCACTTACATTAGATGGAGCTGTTATTCCTAAATTCTCTTTTGGAAGCATTAATGCTATCTCTGGTGCTTCGATTCCAGCCCAAGGGCTTTTGGGCTTGGGTCGTGGTCCATTGTCTTTATTATCTCAGTCAGTGTCAACTTACTCCGGTGTGTTTTCTTATTGTCTACCCAGTTTTAAATCTCAATATTTTTCTGGTTCACTTAAACTCGGACGAGCGGATCAACCCAAGACCATTCAGACAACACCTCTTCTTCGCAATCCTCGACGTCCATCTCTTTACTATGTCAATTTAACTGGAGTTAGTGTGGGTAGTGTGAATGTCCCTATACCCAACAATCTTCTAGCATTTAACCCTAAAATTGGAGCTGGATCGATAATTGATTCGGGTACGGTTATAACCCGCTTTGTGGAGCCCGTTTACAATGCGATACGGGATGAGTTTAGGAAACAAGTGAAAGGACCATTTTCGAGCTTAGGAGCCTACGACACATGTTTTAAGGATACAAATGAAACGACATCACCTGCTATTACGTTGCATTTCCAGGATTTGGATCTGAAGTTACCAATGGAGAATGGTTTAATTCATAGTACTTCAGAGCCTTTGGTATGTCTTGCAATGGCCGCTGCACCAAAGAATGTGAACTCTGTGTTGAATGTGATTGCTAATTATCAACAACAAAATTTGAGGATTTTGTTTGATACGGTGAATAATAAGGTTGGCATTGCCCTCGAGCTTTGTAACTAG 1320 0.4098 MNPKLATTLILSYVFYTCKSNSIDPCASQQDESDLKVSPMYGKCSPINSLKTNSWDDRVINMASKDLDRITYLSTLVAKKSAFSASTPIASGQAFNINNYVVRVKIGTPGQLLSMVFDTSSDEAFIPSLGCTGCSAPKFSPKSSTSYVPLKCFTPQCGLTRGHLCSVKSSNLCSFNQSYADSSFSATLAQDSLTLDGAVIPKFSFGSINAISGASIPAQGLLGLGRGPLSLLSQSVSTYSGVFSYCLPSFKSQYFSGSLKLGRADQPKTIQTTPLLRNPRRPSLYYVNLTGVSVGSVNVPIPNNLLAFNPKIGAGSIIDSGTVITRFVEPVYNAIRDEFRKQVKGPFSSLGAYDTCFKDTNETTSPAITLHFQDLDLKLPMENGLIHSTSEPLVCLAMAAAPKNVNSVLNVIANYQQQNLRILFDTVNNKVGIALELCN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1083 439 PANTHER ASPARTYL PROTEASES 11 439 IPR001461 GO:0004190|GO:0006508
Psa5g1083 439 PANTHER ASPARTYL PROTEASE AED3-LIKE 11 439 - -
Psa5g1083 439 Pfam Xylanase inhibitor N-terminal 100 262 IPR032861 -
Psa5g1083 439 SUPERFAMILY Acid proteases 94 438 IPR021109 -
Psa5g1083 439 Pfam Xylanase inhibitor C-terminal 285 433 IPR032799 -
Psa5g1083 439 ProSiteProfiles Peptidase family A1 domain profile. 100 434 IPR033121 -
Psa5g1083 439 Gene3D Acid Proteases 76 260 IPR021109 -
Psa5g1083 439 Gene3D Acid Proteases 261 439 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1083 Psa-Chr5 84197278 84198734 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1083 90 439 Miscellaneous Gene Families AT1G77480 26.221 1.60e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1083 - - gmx:100788630 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1083 5 84197278 84198734 Psa5g1083 5 84197278 84198734 ECH