Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1054 ATGGGGGCAGAGCCACACCATTCCAGAAGCTTAATCAACAAAATCTACGCTCCAATGGCAAACGAGTTCCCCTTTGCAACCCCTCTTCCGTCTCTCCGAACAAACGAACTTCAACTCGTGCGATGCGTTTTACGAATGCTGCAAGGGTTTTCGTCTTCCTTATTCTCATGGGATCATACTGAAAACCGTTTTCGTATCAATAGCGGAGTCTACGTGACGCATTTGTCCTTGAAGAGTCTACATTCACTCCTCAATCAATTCATTCACGCTGCAACGTGTCTTCAACTCGTGGAGATTACAATCAAGAGGATTGAAACTGCTCTGCCGAGACCTCCTCCCACTTTGAAAGCGTTTGTTACTTCTGCTTCGGCGTGGCTTAAGCGGTTACGGAATATTGCATTGAAGGAGGAAGTGTCTACAAGCAATGCAGATGGCATATCCACTCCAACTTTGTTAGGGTTCAAAAATTCTTTATCAAGTCTTTGCTCGGGTGCTGAGTTCCTATTGCTATTAGTTCATGAGGCCATCCCTGATGTATATTTCGAGTTTGGGGCATCTGTACCTGCAGCAGACTTGGCTGTTCATGTTCTTGACTATCTTCATAAGAAGCTTGAAGAAATGTGTCTTGTACAAGGTGGTGAGGAGGAGGCTTATCTTATGGTGCTTTACATGTATGTGGGAAGCTTGTTGCCATATATTGAGGGTCTTGATTCCTGGCTTTTTGACGGAATACTTGATGATCCTTCTGATGAGATGTTCTTTTTTGCTAATAAAGAAGTCTCAGTTGCTGAGGCTGAGTTCTGGGAGAAGAGTTATCTAATAAAAAAGCTACAACATGGTAAGTTAGATACCGAGTTGTCCTCCACAAATTATGCTGGCGATTCCATGTCAGCATCAAATGAGAAGAAAGAAACAGGCATGAGGGGTTCCATCTCTTTGTCTAGTACAATTAAAGGAAAAGGGCAAAGCATTAGAGACTGTCCAGCTTGTCCTTTGTTTATTAAGGAATTAGCTAAGTCAATTGTTTCTGCTGGAAAATCTTTGCAGCTGATGCGCCATGTCCCGAATTCCTTAGCAGTATGTAGCAAAGGAAGTAGTTGTAAGTTTGGAAGTACCAAATCATTAAACAATGGTTTGCCTCCTTCTCATAGAGTGGCCGGGCTAACGCTGTCAGAAATTTTTTCTGTATCACTAGCTGGACTTATTGGCCATGGTGACCATGTTTGTAAATACTTTTGGCAAGATGATTGGCACGAATCTGTTTCTGTTTCTTCTTTTGTATCTAATTTAAATTTAAATGTGGAAAAATCAGACAATGAAAACTTAACTGCTCCACCATACTTGGAGAAGATTTGGTATAAGTTTTTGATTGATACATTATTTCAAAAAGGATCAGCTGGTTTGAAGCCAAAATATGAAGACATAAATAGTGACAATGGAGATTCAGCAGGGAATAAAGTTGTTAAAGACGAATTGTTTCTCTTGAGATCATGCTTACGAAATCCAGTGGTTACTGTTTGTCGCAAAACAATTGGAAACAATGAGGATGCCTTGAAAACATTGAATTTATCTCGAAAATTCTGCTTGCCTTCTTTAAATGATGAGGGTTTAAGAAAGGCTATATTTGGTGGAGAAAGTACACCGTTTTCTGATAGTGAAGGAACAAACTATACTTTTGGTTTTCAGTATGATGAATCCAAATACACTCACTTACAAGATAAGAGAAGGCTGTTAGAAAAGCTGTTTCCTTTTCCCACCATATTGCCTTCAGTTCAGGATGATCTTCCTGTGTCAGAGCTCTTGCCTTTCCAGAGAAACAGCACTCTTCCTTCAAGAGTTCTTCACTGGGTGCAAAATGTTGACCTAAGAACAACTCCACTACCTCTGGTTATTATGCAGTACTGTTTAACTGCCTACATTCAGAAACAGGTAGATTATATTGGAGTGAATATGTTGTTAAAGTTGATGAATGAATGGAGGTTGATGGATGAGCTTGCAGTGTTGCGAGCTATATACTTGTTAGGTTCAGGTGATTTGCTACAACACTTTTCAACTGTAATTTTTGATAAGTTGGATAAGCGTGAAACATGGGATGATGATTTTGAATTAAACACAATATTACAGGAATCAATCAGAAATTCTGCTGATTGTATGCTGTTAAGTGCTCCGGATTCATTGGTGGTGTCACTAACCAAAAATATTGTTGAGAGTAATGTCAATAACTTCGGGATTAACGGCCTTGATATGCTAAAATTCACATATAAGGTACCTTGGCCTCTTGAACTCATTGCAAACACAGAGGCAATTAAGAAGTACAACCAGGTTATGCGGTTTTTGCTGAAGGTCAAGCGTGCAAAATTTGTTTTAGATAAAGTGCGGAGATGGATGTGGAAGGGTAGGGGGTCTACAACCAATAACAAAAAACGTCATTGGTTAGTGGAGCAGAAACTCCTTCATTTTGTGGATGCTTTTCACCAATATGTGATGGATCGGGTATATCACAGTGCATGGCGTGAACTATGTGAAGGTATGACTGTGGCCAAGTCTCTGGATGAGGTCATTGAAGCCCATGAGGCTTATATTTTGTCGATTCAGCGGCAGTGCTTTGTGGTTCCTGATAAACTGGGGGCTTTGATTGCCAGCCGCGTTAATATCATTCTTGGTTTAGCTTTAGACTTCTATACCATACAACAGACATTAAAAAGTGGCGGAGCTGTTTCTGCAATAAAGACAAAGTGTGAGATGGAAGTCGATCGAATAGAGAAACAGTTTGATGATTGCATTGCATTCCTACTTAGGGTTTTATCGTTCAAACTAAATGTAGGGCATTTCCCTCATTTGGCTGATTTAGTCACCAGAATTAACTACAACTATTTCTATATGTCTGCTAATGGGAATTAA 2901 0.3995 MGAEPHHSRSLINKIYAPMANEFPFATPLPSLRTNELQLVRCVLRMLQGFSSSLFSWDHTENRFRINSGVYVTHLSLKSLHSLLNQFIHAATCLQLVEITIKRIETALPRPPPTLKAFVTSASAWLKRLRNIALKEEVSTSNADGISTPTLLGFKNSLSSLCSGAEFLLLLVHEAIPDVYFEFGASVPAADLAVHVLDYLHKKLEEMCLVQGGEEEAYLMVLYMYVGSLLPYIEGLDSWLFDGILDDPSDEMFFFANKEVSVAEAEFWEKSYLIKKLQHGKLDTELSSTNYAGDSMSASNEKKETGMRGSISLSSTIKGKGQSIRDCPACPLFIKELAKSIVSAGKSLQLMRHVPNSLAVCSKGSSCKFGSTKSLNNGLPPSHRVAGLTLSEIFSVSLAGLIGHGDHVCKYFWQDDWHESVSVSSFVSNLNLNVEKSDNENLTAPPYLEKIWYKFLIDTLFQKGSAGLKPKYEDINSDNGDSAGNKVVKDELFLLRSCLRNPVVTVCRKTIGNNEDALKTLNLSRKFCLPSLNDEGLRKAIFGGESTPFSDSEGTNYTFGFQYDESKYTHLQDKRRLLEKLFPFPTILPSVQDDLPVSELLPFQRNSTLPSRVLHWVQNVDLRTTPLPLVIMQYCLTAYIQKQVDYIGVNMLLKLMNEWRLMDELAVLRAIYLLGSGDLLQHFSTVIFDKLDKRETWDDDFELNTILQESIRNSADCMLLSAPDSLVVSLTKNIVESNVNNFGINGLDMLKFTYKVPWPLELIANTEAIKKYNQVMRFLLKVKRAKFVLDKVRRWMWKGRGSTTNNKKRHWLVEQKLLHFVDAFHQYVMDRVYHSAWRELCEGMTVAKSLDEVIEAHEAYILSIQRQCFVVPDKLGALIASRVNIILGLALDFYTIQQTLKSGGAVSAIKTKCEMEVDRIEKQFDDCIAFLLRVLSFKLNVGHFPHLADLVTRINYNYFYMSANGN* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1054 966 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 4 966 - -
Psa5g1054 966 Pfam Gamma tubulin complex component C-terminal 661 960 IPR040457 GO:0043015
Psa5g1054 966 Gene3D - 661 959 IPR042241 -
Psa5g1054 966 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 4 966 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Psa5g1054 966 Pfam Gamma tubulin complex component N-terminal 40 366 IPR041470 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1054 30 708 Glycosyltransferase AT1G20570 48.637 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1054 K16572 - gmx:100782299 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1054 5 81297020 81308565 Psa5g1054 5 81297020 81308565 ECH