Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1050 ATGCATCAAAAGCATATGTCTAGAGTTTTCATGCAAGGATTTATCTTCCTTGTGATTGCTTCATTGGCTTCAGGATCAGGAAGCAAGGCCAGTGCCAAAAGAAACATCTTGGTTGGAGACTCTGAAGGCTGGCGTGCTGGCACTAACTACACCCGATGGGCCATAAAAAATAGTCCATTCCGCTTAAATGACACATTAGTGTTCAAGTTTCCTCCCCGGGGCAATTCGACCATTGTTCCGAGCGTTTACTTACTACCAAACATGTGGAGTTACATGACATGTGAGTTTAGAGGAGCAAAGTTGCTAGGGAATGCAGTTCAAGGTGTTGGAGAGGGCTTAAAGATTGAGCTGAACCAGTTGAAGCCTTACTATTTTGCCTCTAATGAAGGGAATGCCTATGATTGTATTGCTGGACTCACCAAGTTCATTGCTGTTCCATCTACACGTTCCTTTTAG 456 0.4386 MHQKHMSRVFMQGFIFLVIASLASGSGSKASAKRNILVGDSEGWRAGTNYTRWAIKNSPFRLNDTLVFKFPPRGNSTIVPSVYLLPNMWSYMTCEFRGAKLLGNAVQGVGEGLKIELNQLKPYYFASNEGNAYDCIAGLTKFIAVPSTRSF* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1050 151 Gene3D - 32 147 IPR008972 -
Psa5g1050 151 PANTHER GLYCINE-RICH PROTEIN-LIKE 10 150 - -
Psa5g1050 151 SUPERFAMILY Cupredoxins 35 145 IPR008972 -
Psa5g1050 151 ProSiteProfiles Phytocyanin domain profile. 34 148 IPR003245 GO:0009055
Psa5g1050 151 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 10 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1050 Psa-Chr5 81035953 81036942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1050 38 125 Miscellaneous Gene Families AT3G60270 31.461 1.81e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1050 - - gmx:100810439 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1050 5 81035953 81036942 Psa5g1050 5 81035953 81036942 ECH