Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1044 ATGCAAGCTTCAATGTCACATGAAAAAGTTATTAAAATTTCTATAAAGTCAGAACTTATAAAAAGTTCTTCTCATAATTCACAAGCTATGTCTTCTGTTTCAATAAACAAAGATCTCAGAATTCCTCAAAAATTGCGTAAAGACAGAAAATTGGCTTTGAAGCAAGATGTGGATAGGTTGAAGAAGAAGCTTAAGCATGAGGAGAATATTCACAAGGCATTGGAGAGAGCTTTGAATAGACCTTTGGGAGCTTTGCCTCGTCTTCCTCCTTATCTCCCTCCCTATACATTAGGACTTGTGGCTGAAGTTGCGGTACTTGAAGAAGAAATAAGAAGGCTTGAAGAGATGGTGTTACATTGTAGGAAGGATTTGGATCAAGAAGAAGTTAACATGTCATCCTCCAAGATGAAAATGGAGCATTCACTTGAGAATTCAAAATTGGGCAATGCTGCAATTAGGTCTACAACAACACTTTCTGATGATAGACAAGGAAAAGAGATTCAATCTTGTACTCCTCCTTTCAAGAGCAGCAAACAATCGACATGTAAAGGCCCAACAGCAAAAGTATCTAATAAGAAAATTCCAATCAATGATAAATCGTTGCGTAAACGATCGGAACCTCCTAAAAAGAAGAAGCAGGAACTACGAAATCCTCGTCTACAAGAAACTCCACATAGCGATGAAAGTCCGAATATAATCTCTGAAAATATTCTCAAGTGTTTAACTAGCATTCTCTTGAGAATGAGTACACTACCTTTTAGGCCTCTAAAAGCTAAAAAATGTATTGAAGGAACAGAATTTTTGGATCCCTATGGTATATTGGAATTCGGAAAGAGAGATATTGGTCCATACAAGCAATTAAGTCCAAGTAATATTGAAGCTGAATCTTTCAATCCAACACAAACTGCTAAGTCTTTGTTTCTACTGCATCGGTTAAAAATTCTTTTTAGAAAACTAGCGAGTGTTAATGTCGATAATCTCAACCACCAAGAGAAGCTTGCATTCTGGATCAACATATATAACTCGTGTATGATGAATGCTTTCATAGAAAATGGCATACAAAATAGTCCTGAAAAGGTTGTTGCATTGATGCAGAAGGCTACAATAAATGTAGGTGGAAACTTGTTAAATGCAACAACCATAGAACGCTGTATTTTAAGGCTTCCATATCACTGGAAATATATCGCATTATTAAACGAAGTGAAAAATCATGAAACGACATTAAGAAGTACTTATGGACTCGAATTGTCAGAACCCCTAGTCTCATTCGCTATCTCTAGAGGAACTTGGTCATCTCCCGCTGTAAGTTTATCTATAACATACATTGTAATAGCGAAGACATAA 1344 0.3616 MQASMSHEKVIKISIKSELIKSSSHNSQAMSSVSINKDLRIPQKLRKDRKLALKQDVDRLKKKLKHEENIHKALERALNRPLGALPRLPPYLPPYTLGLVAEVAVLEEEIRRLEEMVLHCRKDLDQEEVNMSSSKMKMEHSLENSKLGNAAIRSTTTLSDDRQGKEIQSCTPPFKSSKQSTCKGPTAKVSNKKIPINDKSLRKRSEPPKKKKQELRNPRLQETPHSDESPNIISENILKCLTSILLRMSTLPFRPLKAKKCIEGTEFLDPYGILEFGKRDIGPYKQLSPSNIEAESFNPTQTAKSLFLLHRLKILFRKLASVNVDNLNHQEKLAFWINIYNSCMMNAFIENGIQNSPEKVVALMQKATINVGGNLLNATTIERCILRLPYHWKYIALLNEVKNHETTLRSTYGLELSEPLVSFAISRGTWSSPAVSLSITYIVIAKT* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1044 447 MobiDBLite consensus disorder prediction 155 228 - -
Psa5g1044 447 Coils Coil 50 77 - -
Psa5g1044 447 Pfam Leucine-zipper of ternary complex factor MIP1 47 127 IPR025757 -
Psa5g1044 447 PANTHER TRANSCRIPTION FACTOR 11 437 - -
Psa5g1044 447 MobiDBLite consensus disorder prediction 195 223 - -
Psa5g1044 447 MobiDBLite consensus disorder prediction 155 187 - -
Psa5g1044 447 PANTHER EXPRESSED PROTEIN 11 437 - -
Psa5g1044 447 Pfam Protein of unknown function, DUF547 325 436 IPR006869 -
Psa5g1044 447 Coils Coil 96 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1044 Psa-Chr5 80469715 80473742 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1044 - - gmx:100807554 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1044 5 80469715 80473742 Psa5g1044 5 80469715 80473742 ECH