Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1042 ATGGCAAAATTTTCTGTCTCCCCTCTCTGCTCTCCCCCCTCTCCTCGTCTTCAACTTCACCGGCAACCATTCTTCACCGTTTCTCAACCCATCGCTCATCCCGCTTCTTCCGCAACCGATTCCAATTTCACTTTCACTTTCGCCACCACTTCCAATCTCACTCCCAAAGTCGTCGTCACCAGAGAACGTGGCAAAAACAACAAGCTTATCAATGCTCTGGCCAAACATGAAATCAGTTGTTTGGAGCTTCCACTCATTGAGCACCTACGGGGACCTGATTTTGACAGGCTTCCTCATGCATTAAGTGATAATGCATTTGATTGGATTATCATAACTTCTCCGGAGGCTGGTTCAGTCTTTCTGGAGGCATGGAAAACTGCTGGAATGCCCCGCACCAGAATAGGCGTTGTTGGATCAGGTACTGCAAGCATTTTCAAGGAAGCTTTGCTGTCTTCAAACAAATCGCTTGATGTTGCCTTTTCACCATCAAAAGCAACAGGAAAAGTTTTGGCTACAGAGCTTCCCAAAATCGGAAATAAAACCACCATTCTATATCCTGCTTCTGCAAAGGCTAGCAATGAGATTGAGGAAGGGCTCTCAAGTCGCGGATTTGAAGTTACTAGGATGAATACATATACAACGGTACCAGTTCAACATGTTGACCAGATGGTTCTAAAGCAAGCACTTGCTGCCCCTGTTGTTACAGTAGCTTCACCATCTGCAATTCGGGCCTGGAAGAATCTCCTTTCAGATTCTGACTGGAGCAATTATGTTGCATGCATTGGTGAGACAACTGCTGCAATGTCAAGAAGATTAGGCTTCAAAAATGTGTACCACCCAACACAACCAGGCCTTGAAGGCTGGGTGGAAAGCATCCTTGAAGCATTAGGATCCTATGATGAATTATTGAGGATTGTTGAGACTTCAAATGTAGAGAGTGAGAGTGGAGTTTTCTGGTTATGGTGA 966 0.4524 MAKFSVSPLCSPPSPRLQLHRQPFFTVSQPIAHPASSATDSNFTFTFATTSNLTPKVVVTRERGKNNKLINALAKHEISCLELPLIEHLRGPDFDRLPHALSDNAFDWIIITSPEAGSVFLEAWKTAGMPRTRIGVVGSGTASIFKEALLSSNKSLDVAFSPSKATGKVLATELPKIGNKTTILYPASAKASNEIEEGLSSRGFEVTRMNTYTTVPVQHVDQMVLKQALAAPVVTVASPSAIRAWKNLLSDSDWSNYVACIGETTAAMSRRLGFKNVYHPTQPGLEGWVESILEALGSYDELLRIVETSNVESESGVFWLW* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1042 321 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 7 299 IPR039793 GO:0004852|GO:0006780
Psa5g1042 321 SUPERFAMILY HemD-like 56 297 IPR036108 GO:0004852|GO:0033014
Psa5g1042 321 Gene3D - 207 296 IPR036108 GO:0004852|GO:0033014
Psa5g1042 321 Pfam Uroporphyrinogen-III synthase HemD 69 290 IPR003754 GO:0004852|GO:0033014
Psa5g1042 321 Gene3D - 99 206 IPR036108 GO:0004852|GO:0033014
Psa5g1042 321 CDD HemD 57 292 IPR003754 GO:0004852|GO:0033014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1042 K01719 - gmx:100808086 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1042 5 80424170 80429313 Psa5g1042 5 80424170 80429313 ECH