Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1034 ATGGAAACCAAAGATCCTCTAGATATAAAATATACAAAGAAATTACCATTAACATTGAGGTTGATAGTTTTAGCCATCGCAGTGGTTTGTGGAATATACATATGCTCAATTTGCTTAGAGCTAAAAGGTATACGCACAACTTCAAACTTTTTAGGTGTTAGTATCTTCAAGCAACCATGTCCTTTTCCTTCCAACGTCCAAGATTGGGAACTTCCATATTTGCATTATCCACAACCCAACACCTATAGCAGAGAGGAATGTAGTTGCAATCCGGTTCGATATTTTTGCATTGTATCAATGCAAAGATCTGGGAGTGGATGGTTCGAGACGTTTTTGAACAGTCATATTAACATAAGCTCCAATGGAGAAATATTTTCGGTTAGCAAAAGAAGAGAAAACGTTTCTTCAATTTTGAAGACGATAGATGAAGTTTATAATCTCGATTGGTTAACCAGTGCTTCCAAGAATGAATGTTCTGCTGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAGCATCATAAAGAAATAGTGGATTATTTGGAGGAGAAACAAGTTTCTATGATATTCTTGTTTAGAAGAAATTTGCTTCGTAGAATGGTATCTGTGCTAGCCAATACTTATGATAAAGATTTCAAGCTATTAAATGGAACACACCAGTCTCATGTGCATTCTACAGTCGAGGCTTCGATTCTTGCAAAGTACAAACCACAAATCAATAGCACGATATTGATTCCAGAGCTAAAGCAAACGGAGGAGACGATTCGAAAAGCGATTGCGTATTTTAAGAACATTCGTCACGTCGTTCTTTACTACGAGGATCTTGTTAACAACCGCAATAAATTGAAGGATGTTCAAGAATTTCTAAGGGTGCCATACAGAGAACTAGAGAGTCGTCAAGTGAAGATACATACAGCACCATTATCGATGCAAATTGAAAACTGGGATGAAGTTCGGAAAGTGCTGAAAGGGACCACGTACGAGAGTTATCTTTATGACTAA 1008 0.375 METKDPLDIKYTKKLPLTLRLIVLAIAVVCGIYICSICLELKGIRTTSNFLGVSIFKQPCPFPSNVQDWELPYLHYPQPNTYSREECSCNPVRYFCIVSMQRSGSGWFETFLNSHINISSNGEIFSVSKRRENVSSILKTIDEVYNLDWLTSASKNECSAAVGFKWMLNQGLMEHHKEIVDYLEEKQVSMIFLFRRNLLRRMVSVLANTYDKDFKLLNGTHQSHVHSTVEASILAKYKPQINSTILIPELKQTEETIRKAIAYFKNIRHVVLYYEDLVNNRNKLKDVQEFLRVPYRELESRQVKIHTAPLSMQIENWDEVRKVLKGTTYESYLYD* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1034 335 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 334 - -
Psa5g1034 335 Gene3D - 92 322 IPR027417 -
Psa5g1034 335 PANTHER SULFOTRANSFERASE 1 334 - -
Psa5g1034 335 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1034 Psa-Chr5 78875176 78877021 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1034 - - gmx:100808615 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1034 5 78875176 78877021 Psa4g2037 4 155779350 155782476 ECH
Psa5g1034 5 78875176 78877021 Psa7g2810 7 201534662 201538146 ECH
Psa5g1034 5 78875176 78877021 Psa2g3762 2 400025989 400030721 ECH
Psa5g1034 5 78875176 78877021 Psa5g1034 5 78875176 78877021 ECH