Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1030 ATGGAGAGAACACAATCTTCACTTCTACAAATTCAGCCTCCAACTTATGGAAACTTAGTGACAATTCTAAGCATCGATGGTGGCGGTATTAGAGGCCTTATTCCTGCAACTATTCTCGAATACCTTGAATCAGAACTTCAGGAATTAGACGGTGAATCTGCACGACTTGCCGATTACTTTGATGTGATTACAGGAACAAGTACTGGTGGTCTTGTAACTGCCATGTTAACTGCTCCAAATGATAAACAACGTCCACTTTTTGCTGCTAAAGATATCAAACCCTTTTACTTGGAACACTGTCCAAATATTTTCCCACAAAACAAGCACATGTTAGGTTCAATGGAGAAGTTGTTTAGATCATTGGCAGGACCAAAATACGATGGAAAATACCTTCACAATGTGGTGAGGGAAAAGCTTGGAGAAACTCGTGTGCATGAGACTCTCACCAATATTGTGATCCCCGCGTTTGACATTAAGTCGATGCAACCAATCATTTTTTCAACTTATCAAAGCAAGAGAACCCCATGCATGGATGCTCGACTCTCTGACATATGCATCAGTACTTCTGCGGCTCCCACCTATCTTCCGGGTTACAACTTCAAGAACCAAGACACAGAAGGAAACGCACATGAATTCAACCTTATTGATGGTGGTGTTTGTGCGAATAATCCGACTTTAGTGGCCGTGAATGAAGTAACCAAGCAAATAGTTAATCAGAATAATGACTTTTACTCCATCAAGCCCATGGAATATAGTCGCTTTCTGATAATTTCATTGGGAACTGGTACACCAAAGAACGAACAAAAGTTTGATGCAAAAATTGCAGCAAAATGGGGTCTGTTGAATTGGTTAACTCATGGTGGTTCCACTCCCTTAATTGATATTTTTAGTCAAGCCTCCGGAGATATGGTTGATTTTCATATTGCTACTGTCACTCAAGCCCTTACCTGTCAAGATAATTATCTTCGGATACAAGATGATACATTGACTGGTATAGACTCTTCGGTTGATATTGCCACGAAAGAGAATTTAGAAAACCTATGCAAAATTGGAGAAAGGTTATTGAAGAAACCTGTAACTAAGGTCAATTTAGAGAACGGTATGTGTGAGCCTACGGAAAATGCTGAGACCAACCAAGAAGCTCTCAAAAGGTTTGCAAAAATACTATCACAAGAGAGGAAGCTTCGAGAATTGACATCTCCTCACACTAACAAGAACTTAAAATAA 1227 0.3977 MERTQSSLLQIQPPTYGNLVTILSIDGGGIRGLIPATILEYLESELQELDGESARLADYFDVITGTSTGGLVTAMLTAPNDKQRPLFAAKDIKPFYLEHCPNIFPQNKHMLGSMEKLFRSLAGPKYDGKYLHNVVREKLGETRVHETLTNIVIPAFDIKSMQPIIFSTYQSKRTPCMDARLSDICISTSAAPTYLPGYNFKNQDTEGNAHEFNLIDGGVCANNPTLVAVNEVTKQIVNQNNDFYSIKPMEYSRFLIISLGTGTPKNEQKFDAKIAAKWGLLNWLTHGGSTPLIDIFSQASGDMVDFHIATVTQALTCQDNYLRIQDDTLTGIDSSVDIATKENLENLCKIGERLLKKPVTKVNLENGMCEPTENAETNQEALKRFAKILSQERKLRELTSPHTNKNLK* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1030 408 Gene3D Cytosolic phospholipase A2 catalytic domain 10 400 - -
Psa5g1030 408 PANTHER PATATIN 1 405 - -
Psa5g1030 408 Pfam Patatin-like phospholipase 23 228 IPR002641 GO:0006629
Psa5g1030 408 PANTHER XYLOSE ISOMERASE 1 405 - -
Psa5g1030 408 SUPERFAMILY FabD/lysophospholipase-like 18 380 IPR016035 -
Psa5g1030 408 CDD Pat17_isozyme_like 17 367 - -
Psa5g1030 408 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1030 Psa-Chr5 78828399 78830329 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g1030 11 408 Miscellaneous Gene Families AT2G26560 63.819 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1030 - - gmx:100783909 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1030 5 78828399 78830329 Psa5g1030 5 78828399 78830329 ECH