Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g1014 ATGGAGGATGTTCAAGACAAGTTACTCTCAGACTCCTCTACAAAAATTGCTGAAGAGACACCACTGGCAGGACATGTTGAAGACACGTTGCCCTCTGAATCTTCTTCAAAAATGACTCAAGAGACACATATGGAAGAACACTTTGAAAACAAGCTACCCTCTGACTCCTCTACAAAAGTTGCTGAAGAGACACCACTTGCAGAACTAGTTGAAGACATGTTGCCCTCTGAATCTTCTTCAAAAACTACTGAAGAGACGCGTATGGAAGAACACGTTGAAGAGATGTTGCCCTCTGAATCTTCTTCAAAAACTACTGAAGAGACACGTATGGAAGAACACGTTGAAGACAAGCTACTCTCTGACTCCTCTACCAAAATTGCTGAAGAGACACCACTGGCAGGACATGATGAAGACATGTTGCCCTCTGAATTTTCTTCAAAAAATGCTGAAGAGGTACATATGGAAGACCGCGTTGACGACAAGCTACCCTCTGAATCCTCTTCAAAAATTTCTGAAGAGACGCCAGTGGCACAACATGTTGAAGACAATCTACTCTTTAATTACTCTACAAATAATACTGAGACACCACTTACGGAGCCCTCTGAAGAAAATACTGTAGTGATAAACCCACCATATAATCAATCTTCCACAGAAATTCCAATTCCACTTAGTAATGGTGAAGTGAATTCTGGCTCTCACATGACAGTGAATGAGTCCCCTGAGTTATCAGTGCTGCCAAATGCTTCTGATGGTCACACTATAATACCAGACGAGGATGTTTCTGTAGCTAATTCAGCTTCAATTCCAAATGATAAGGTCGATCTAACAGAAAGAAGCGGTCAGGTAACATTGGTTGAAGATTCTGAACCAGGTGCTACAGAAGATCTCTCTGACAGGCATGAATTGCAGGTCGATGTTACGAATGCTGCTTCTGATAATGAGATTAGACTTTCTGCTTCTTCTTCTGAAACAAATGATTTTTTAACTGATCACAATCAAGTAAAGATGGCCGTTGGAGCAGTGGACTCGTCCACTCAAACCAAGCTGGTTAATGTAAAAAGAGGCCTTATTGATACCACACCTCCATTTGAATCTGTCAAGGAAGCTGTTTCTAAGTTTGGAGGAATTGTGGATTGGAAGGCTCATAGAATCCAGACTGTGGAGAGGCGCACTCTAGTTGAGCAGGAACTTGATAAAGCAAATGAGGAGATCCCAGAATACAAAAAACAAGCAGAGGTGGCTGAACAGACAAAAGTTCAAGTACTAAAGGAGCTGGACAGCACGAAGCGACTTATAGAAGAGTTAAAGCTAAACCTAGAGAGGGCACAAACCGAGGAGCATCAGGCAAGACAGGACTCGGAACTTGCAAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATTGCGGACGAGTCTAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTATTCAGCAGCCATTACAGATTTAGCAGCTGTGAAAGAGGAGCTAGAAGCATTGCGTAAGGAGTATGCTTCCTTAGTGACTGATAGAGATGAAGCTATTAAGAAAGCCGAGGAGGCAGTTACAGCATCCAAGGAAGTAGAGAAGTCAGTGGAAGATTTAACTATTGAATTAATCGCCACAAAAGAGTCATTGGAAACTGCTCATGCCGCACACTTGGAAGCAGAGGAACATAGAATAGGAACAGTCATGGCAAGAGATCAAGATTCTCTCAATTGGGAAAAGGAACTTAAACAGGCAGAAGAGGAGCTCCAGAGAATCAATGGGCAAATGTTGTCTGTAAAGGATCTCAAATCCAAACTAGAAACAGCCTCTGGTTTGCTGCTTGATTTGAAAGCTAAATTAACTGCTTATATGGAATCAAAGTTAAAGGAAGAAAGTGATGAAGAGCTTTCACAAGGAGGCCTAGAAGAACCAGGAAAGAAGACACGCACTGAAATACAAGCAGCTGTGGAATCAGCCAGAAAGGAACTTGAGGAGGTAAAACTTAACATAGATAAAGCAAATACGGAGGTTATTTGCTTGAAGCTAGCTGCTACATCTTTAAAAGCAGAGCTGGAACAAGAAAAATCAACTCTTGCCTCCATCAGGCAAAGAGAAGGAATGGCCTCTATTGCAGTTGCATCTCTAGAAGCTGAGTTGGACAAGACTAGATCAGAAATAGCTTTGGTACAGATGAAGGAGAAAGAAGCCAAAGAGCAAATGGCCGAACTTCCAAAGAAGCTACAACTAACAGCTGAAGAGGCTAATCAGGCCAACTTGCTTGCTCAAGCAGCTCGTGAAGAACTGCAGAAAGTAAATGCAGAAGCAGAACAGGCCAAGGCTGGAGTAAGTACCTTGGAAAGCAGGTTACTTGCTGCTCAAAAGGAGATAGAGGCTGCAAAGGCTTCTGAAAAGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAGTCAAATAGAAGCAAAAATGAAGTGGACCCTTCCAGCGGGGTAACACTTTCTTTGGATGAGTACTATGAGCTTAGCAAACGAGCTCACGAGGCAGAAGAGCGAGCCAATATGAGGGTTGCAGCTGCTAATTCTGATGTTGAGAAAGCTAAGAACTCTGAATTAAAATCCTTTGAGAAGTTGGATGAAGTAAATAGAGAGATAGCTGCTAGAAGGGAATCCTTGAAGATGGCAATGGAAAAAGCTGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAACTTAGAAAGTGGAGGGCTGAAAATGAGCAACGGAGAAAGGCTGGCGAGTCTGGCCAAGGAATGCTTGACCAGAACAAAAGCCCTAGAGCTAGTTTTGAGGGGAGCAAGGAAGCAAACAATTTTGACCGGTCCCGAAACCCATCAAGTCCGAAAGCTGATATGCACGCAGAAAATGATGAAGCTGGATCATCACCGGAATCAAAACATGGAAAAAAGAAGAAATCTATGTTCCCACGAGTTTTGATGTTCTTTGCTAGAAGAAAAAAACATTCACACAAGTCAGGATATCTCACCTCTCATCCTGTTGGAGATCTCAGTGACTTGAAATGCTGGACTACACAAAGTTCTGTCGAGCCTATTTATGGTGATAGCTTTGTGTATGCTTTGATTGGATCATAA 3129 0.426 MEDVQDKLLSDSSTKIAEETPLAGHVEDTLPSESSSKMTQETHMEEHFENKLPSDSSTKVAEETPLAELVEDMLPSESSSKTTEETRMEEHVEEMLPSESSSKTTEETRMEEHVEDKLLSDSSTKIAEETPLAGHDEDMLPSEFSSKNAEEVHMEDRVDDKLPSESSSKISEETPVAQHVEDNLLFNYSTNNTETPLTEPSEENTVVINPPYNQSSTEIPIPLSNGEVNSGSHMTVNESPELSVLPNASDGHTIIPDEDVSVANSASIPNDKVDLTERSGQVTLVEDSEPGATEDLSDRHELQVDVTNAASDNEIRLSASSSETNDFLTDHNQVKMAVGAVDSSTQTKLVNVKRGLIDTTPPFESVKEAVSKFGGIVDWKAHRIQTVERRTLVEQELDKANEEIPEYKKQAEVAEQTKVQVLKELDSTKRLIEELKLNLERAQTEEHQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYSAAITDLAAVKEELEALRKEYASLVTDRDEAIKKAEEAVTASKEVEKSVEDLTIELIATKESLETAHAAHLEAEEHRIGTVMARDQDSLNWEKELKQAEEELQRINGQMLSVKDLKSKLETASGLLLDLKAKLTAYMESKLKEESDEELSQGGLEEPGKKTRTEIQAAVESARKELEEVKLNIDKANTEVICLKLAATSLKAELEQEKSTLASIRQREGMASIAVASLEAELDKTRSEIALVQMKEKEAKEQMAELPKKLQLTAEEANQANLLAQAAREELQKVNAEAEQAKAGVSTLESRLLAAQKEIEAAKASEKLAIAAIKALQESESNRSKNEVDPSSGVTLSLDEYYELSKRAHEAEERANMRVAAANSDVEKAKNSELKSFEKLDEVNREIAARRESLKMAMEKAEKAKEGKLGVEQELRKWRAENEQRRKAGESGQGMLDQNKSPRASFEGSKEANNFDRSRNPSSPKADMHAENDEAGSSPESKHGKKKKSMFPRVLMFFARRKKHSHKSGYLTSHPVGDLSDLKCWTTQSSVEPIYGDSFVYALIGS* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g1014 1042 MobiDBLite consensus disorder prediction 627 648 - -
Psa5g1014 1042 Coils Coil 746 801 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 82 97 - -
Psa5g1014 1042 Coils Coil 876 917 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 1 180 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 930 944 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 130 167 - -
Psa5g1014 1042 Coils Coil 390 452 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 104 123 - -
Psa5g1014 1042 Coils Coil 711 738 - -
Psa5g1014 1042 Coils Coil 479 520 - -
Psa5g1014 1042 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 249 1000 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 958 981 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 39 53 - -
Psa5g1014 1042 Coils Coil 648 703 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 893 985 - -
Psa5g1014 1042 MobiDBLite consensus disorder prediction 893 926 - -
Psa5g1014 1042 Coils Coil 574 618 - -
Psa5g1014 1042 PANTHER WEB FAMILY PROTEIN-RELATED 249 1000 - -
Psa5g1014 1042 Pfam Weak chloroplast movement under blue light 354 921 IPR008545 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g1014 Psa-Chr5 76153997 76158171 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g1014 - - gmx:100812902 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g1014 5 76153997 76158171 Psa5g1014 5 76153997 76158171 ECH