Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0924 ATGAAACCTGTGTTTGCAACATTCCTTATGTGCCTTGTCCTCAGTTTCTCAGTATTGGAACTTTCATCAGCTGGTTCGGATTTTTGTGACACAAAGTGCGGAGAAAGGTGCTCGAAAGCTTCGGTGCAGGATAGATGCTTGAAGTATTGTGGGATCTGTTGTGAGAAATGTAGTTGTGTTCCATCTGGAACTTATGGTAACAAAGATGAGTGTCCTTGTTACAGAGACATGAAGAACTCAAAAGGACAAGGAAAATGCCCTTAA 264 0.4167 MKPVFATFLMCLVLSFSVLELSSAGSDFCDTKCGERCSKASVQDRCLKYCGICCEKCSCVPSGTYGNKDECPCYRDMKNSKGQGKCP* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0924 87 Pfam Gibberellin regulated protein 28 87 IPR003854 -
Psa5g0924 87 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 2 87 - -
Psa5g0924 87 PANTHER GIBBERELLIN-REGULATED PROTEIN 10 2 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0924 Psa-Chr5 71193712 71194614 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0924 - - mtr:MTR_3g102660 150.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0924 5 71193712 71194614 Psa5g0924 5 71193712 71194614 ECH