Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0921 ATGCTTTCACAAATGAAGAAAAAATCATCAACCGACAACAACATTCCGAAAACTCCTAACAACACCAGTAATGATGATTCAACCGAACATTCTCCGCATATTCAACTTTGTAACAACCCATGTTGTTTTTTCTGCATAATGAAACAACAAAATCCATCTCTCAGAAAATCAAAAATATCAACCTGCTTCAAAGAAATGCCTCAAAGAGACAATCAAGAACATGTCTTAGTCCTCAGTGGACTATGGAACATAGCCATGAAACAACCCAACGATCCAGAGTTTCCTTCTCTAGGCCTATTCAACTGCATGGCGAAACTCATCCTCAAAGGTACCAAAAACAAAAACTGGCTTCTTCAAAATCAAAATATTTACATACCTTATTATGCTGCTCATATTATTGGCTCTTACACCATGCACAGAGAAGATTTTGCACAGATAGCTATTCAATCTGGTGTTCTACCACCGTTGTTAGAGCTTCTGAAAGGTAAAATAAGTTGGGTCGAACAAAGAGTTGCTGTTAGAGCATTTGGTCATTTAGCTAGTTACAAAAGCACTTTTGAATTAGTCTCTGAGTATGAATCTGAGTTGGTGAAATCGACAATGAATTTGGCTTCATCTTGCTTAGAAAAAATCTATGTTGAATTTGTATCTGATAATAAGAAAAGAGTTGAGTATCATAGAAACTTGCTTACAAGAGGTTTAGGTGATTTGGAAATGGAGAATCGAAAAGCTGAAGAATGGGCTAGTCAACTTCAATGTTGGTGTATTCATCTTCTGAATTGCTTTGCTTCCAAAGATTCTAAGTCTTTGGATTTAATATGCAAAAATGTTTTCTTGAATGATCTGTGTGATATGTGGGGTGGATTGGTAAATAACACCTCACCGGGTGGGTTTGGACTCATTAGAATCCTTTGTTATAATAAGTTAGGAAGAACAAAAATTGCTGAGTCACCAAAAGTTTTGAAAAGTTTATGTAACCTCTCAAGATCTTGTGATGATTGGCAGTACCTAGGTATATATTGTCTTTTATTGCTTCTCAAGGACCAAAATACTAGGCACAAAGTTATTGATGTTGATAGTGTTGATGTTGTTTCATGTCTTGTTGATTTGGTTGAACTTAGAAGACTTGGTGATAAATCAAACGTTGGTGAGACCATCACCAAGAGTCAAATATACAAAAGTGTTAAGGTTCCTTATCATGTTGCTAGGATGTTTTGTAAACAAATGGATGACACGTGGCTCTTTAGGAATGCTCGTTCAAAGATAAAGTCAAAGGTAATAGAGAAGATTGATGTCTCAATGGTGGAAAACAATTGTGAAATGGAAGGTGGTTATGAGAGTGAAAATGAGAGCAACTATGGAGACCAAACCTATGATGATAAGAAGAATTTCATGGCAGGTTTGTGTACCATAATGGAAGAACCTTTTGATGGGAAAGAAGGTAGAAGGAGAAAGATGGAAAGAGCAAGAAGGAGATTAAAGAAAAGTGTTGTTGTAACTCGATTAGCGTAA 1512 0.3604 MLSQMKKKSSTDNNIPKTPNNTSNDDSTEHSPHIQLCNNPCCFFCIMKQQNPSLRKSKISTCFKEMPQRDNQEHVLVLSGLWNIAMKQPNDPEFPSLGLFNCMAKLILKGTKNKNWLLQNQNIYIPYYAAHIIGSYTMHREDFAQIAIQSGVLPPLLELLKGKISWVEQRVAVRAFGHLASYKSTFELVSEYESELVKSTMNLASSCLEKIYVEFVSDNKKRVEYHRNLLTRGLGDLEMENRKAEEWASQLQCWCIHLLNCFASKDSKSLDLICKNVFLNDLCDMWGGLVNNTSPGGFGLIRILCYNKLGRTKIAESPKVLKSLCNLSRSCDDWQYLGIYCLLLLLKDQNTRHKVIDVDSVDVVSCLVDLVELRRLGDKSNVGETITKSQIYKSVKVPYHVARMFCKQMDDTWLFRNARSKIKSKVIEKIDVSMVENNCEMEGGYESENESNYGDQTYDDKKNFMAGLCTIMEEPFDGKEGRRRKMERARRRLKKSVVVTRLA* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0921 503 Gene3D - 112 378 IPR011989 -
Psa5g0921 503 SUPERFAMILY ARM repeat 117 362 IPR016024 -
Psa5g0921 503 SMART arm_5 140 181 IPR000225 GO:0005515
Psa5g0921 503 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 21 389 - -
Psa5g0921 503 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 389 490 - -
Psa5g0921 503 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 21 389 - -
Psa5g0921 503 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 389 490 - -
Psa5g0921 503 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0921 Psa-Chr5 70944712 70946823 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0921 - - gmx:100777591 516.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0921 5 70944712 70946823 Psa5g0921 5 70944712 70946823 ECH