Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0892 ATGAAAGATGCATCCAGTCCTTGGAACTCTGATGAACTCCGGAGAGATCTTCTTACTGCCATGGGCACTGCTAAGTGGCAGTTAGATGAATTTCAACGGGCTGTGAAGTCGAGTTATAGAAAAAGCTCGAGTGATGATGCTAGAAATAGGCACCAAGATTTCGTTGCTGCGATTGAAGCCAAGATTTCGAAAGTGGAGAATTTGTTACAACTGCATGAATCTGTTCCTTTAGGTAGCAAGGTGTCTCTGCCTTGGGTGTCGCTGGATGAAGGAGAGCGAAATGAGCTTGCATCGTTTCTTTCAGGGATGCCGCTGTCGCCTTCTGGTGGCAAACCGCCGCTTAGGTTTACTGGGAGAGACACTGTAAATCCAAAATTAGGTGATACGGATTCGGTTAGAGCAGCGGTTGAGGTGGAGGAGAAACCATATGGACATCGCAGGGTGGCTAGCGCTGGTGCTGATATTAGTTCTTGGAAAATTGCTGTTCTGGATAATGTGCAACAATCGACTTCCTCCAATGATTCTTCTGGTCCTACTCCTATGCATAAGGTCGCCAGTGTCTCTGGATTCTTTAGTTCCGTGGAATCCATTTCTAAATGGCCGAAGAATGGTTATAGGAAGCTGAAAGCAATGGATAGTCATCAAGAAACTGATAATGCACTACTACTACCATCAACCGAATGTAATGGGGTCATCAATGATTGCAATGAAAAAAGTAAGATTTGCCTTCATAGTTGTGATGGATGTTATAATAAGCCACTCCACGGGTGGTATGGGGCTTTACAAAGACAGCTTCAAAGATCTCAATACCAAATGCAGTACAACCGGCCTGTTCAAATAGCTGTCTGGATAGTTATTATCCTTTGCTTCATTGTTTTAATTGCATTTTATGCAATGTAA 900 0.4356 MKDASSPWNSDELRRDLLTAMGTAKWQLDEFQRAVKSSYRKSSSDDARNRHQDFVAAIEAKISKVENLLQLHESVPLGSKVSLPWVSLDEGERNELASFLSGMPLSPSGGKPPLRFTGRDTVNPKLGDTDSVRAAVEVEEKPYGHRRVASAGADISSWKIAVLDNVQQSTSSNDSSGPTPMHKVASVSGFFSSVESISKWPKNGYRKLKAMDSHQETDNALLLPSTECNGVINDCNEKSKICLHSCDGCYNKPLHGWYGALQRQLQRSQYQMQYNRPVQIAVWIVIILCFIVLIAFYAM* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0892 299 SUPERFAMILY t-snare proteins 9 69 IPR010989 GO:0016020|GO:0016192
Psa5g0892 299 PANTHER OS05G0443700 PROTEIN 2 296 - -
Psa5g0892 299 Pfam Syntaxin 6, N-terminal 7 66 IPR015260 GO:0016020|GO:0048193
Psa5g0892 299 PANTHER EXPRESSED PROTEIN 2 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0892 Psa-Chr5 69743687 69745970 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0892 - - mtr:MTR_3g102790 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0892 5 69743687 69745970 Psa5g0892 5 69743687 69745970 ECH