Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0874 ATGAAGGGAGTAATATATCAAAGTGCAATGGGAAAACACAAGGTTTCAATGTTGTTGCTTTGTGTATTCTTTTCCTTCCTAGAATTCAAAGTTGAAGCAAGAAAATCATCACCTTTAGAAAGAGAAATCGAAGCTAAATTGAAACTTTTAAATAAGCCAGCAGTGAAAACTATTAAGAGTGAAGATGGAGATATTATTGATTGCGTTGATATTTACAAACAACCAGCTTTTGACCATCCTGCCTTAAAAAATCATAAAATACAGAGGATGCCGAGTTTTCTTCATGAATCCGAAATTTCAAGCACAGTAGGTGTTTTCAACGCAAGCTCTGATGTGTTTCAGACATGGCAGAAAAGTGGAAGTTGTCCTGAAGAAACTATCCCTATCCGAAGAATTCGAAAAGAGGACTTACTGAGAGCAGGTTCACTTGATCGTTTCGGACGAAAACCCCCTGAAATATTTGATAACTCAACAAGCACCATGAGTGGTATAGTCGAAGTGACAAATCGCTCGGATGCATATCTTGTAGCAGTGGGATATAATTTCATAGGGGGACAGGCAAATATTAACGTGTGGAATCCTAGAGTTGAAAAACCAGAAGATTTCACTACTGCTCAATTGTGGCTTAAAGCTGCTAATGGTGATAATAATTTCGAAAGCATCGAAGCCGGCTGGATAGTTAATCCAAAGTTGTATGGTGACCACAGAACCCGATTATTCGTCCATTGGACTAGAGATACATACAGAGAAACAGGGTGCTTTGATCTTTTATGCTCAGGTTTTGTGCATACAAACAAGAATATAGTGCTTGGTGGTACCATGGGACCTATTTCATCCCCTGGTGGTCAACAATATGAACTCAACTTCGCAATATATTCGGATTATCATGGAAAGTGGTGGCTTAAAGTGAATAATAACATTCCAGTAGGCTATTGGCCGGCCGAGATAGTGAGGAACTTACAACACAGTGCATCATTGGTTCAATGGGGTGGACAAGTTTTTAGTTATGAGGTCAAAACAGACCCTCCCCACACTGGAACAGAGATGGGTAGTGGAGGAGCAGCAGGGGGACGATTCGGGCATGCATGCTATATGAGTGCTGTGAGAATTATAGATTATTCACTAAAACTTAAGTATCCGCCAATTGTAGGCGCTCACGCTTCAGAACCAGATTGTTACAATACTTTAAATGATGTTCAATATGGAAAAGACCCTGTATTCTATTTCGGAGGGGCTGGACGAAACCCTCATTGTCCTTGA 1260 0.4024 MKGVIYQSAMGKHKVSMLLLCVFFSFLEFKVEARKSSPLEREIEAKLKLLNKPAVKTIKSEDGDIIDCVDIYKQPAFDHPALKNHKIQRMPSFLHESEISSTVGVFNASSDVFQTWQKSGSCPEETIPIRRIRKEDLLRAGSLDRFGRKPPEIFDNSTSTMSGIVEVTNRSDAYLVAVGYNFIGGQANINVWNPRVEKPEDFTTAQLWLKAANGDNNFESIEAGWIVNPKLYGDHRTRLFVHWTRDTYRETGCFDLLCSGFVHTNKNIVLGGTMGPISSPGGQQYELNFAIYSDYHGKWWLKVNNNIPVGYWPAEIVRNLQHSASLVQWGGQVFSYEVKTDPPHTGTEMGSGGAAGGRFGHACYMSAVRIIDYSLKLKYPPIVGAHASEPDCYNTLNDVQYGKDPVFYFGGAGRNPHCP* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0874 419 Gene3D - 191 307 - -
Psa5g0874 419 PANTHER ASLB (DUF239)-RELATED 22 417 - -
Psa5g0874 419 Pfam Neprosin activation peptide 57 154 IPR025521 -
Psa5g0874 419 Pfam Neprosin 200 411 IPR004314 -
Psa5g0874 419 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 22 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0874 Psa-Chr5 68260799 68262517 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0874 - - mtr:MTR_3g103980 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0874 5 68260799 68262517 Psa5g0874 5 68260799 68262517 ECH