Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0862 ATGTCTTCATGGCTTGCTCGTTCCCTTGCAAACTCTCTCCGACTCGACGATGAAGGTAACATTGAAAACGACGTCGTAACCAACCCTCCAACACCCTCCCCCAGAAATTACCCTCAACAAAATCAATCACAAGATAATGCAATTGAATCACAATCACAACATCAACAACAGCATCATCACGATGATGATGATGACGATGAAACGCAAGGTCGTGGTGTTAAAGAAGACCTGGATGAAATCAAACAAACCCTAACTCGTCAATTTTGGGGAATGGCTTCGTTTCTCGCTCCTCCCCCAACAACTTCTCAATCCGATCACACTTTCCCTCGCAAACTAGAAGAAGAACATCATCAGCGACAATTTGATGACGCTGTAATCTCGAATCCATCTTTGGATATGGAACAAGGTGCGCTCCGCGAGGATGATCCTGACCCGAATTCGAATACATTTGGATCCGATTCGGATGGAGACCGGGACCAGGAGTTTGATATCCCATCCGCGGTTGGAATTACGGAGGAGGTATTGACCTTCGCTTTGAATATCGCTATGCATCCTGAGACGTGGCTGGATTTTCCTATTGATGAGGAAGATGATACCGATGATTTTTACATGTCCGAAGAACAACAAGAGCATGCTTTGGTCGTTGAAAGACTTGCTCCGAGATTAGCTGCACTCAGAATTGAACTGTGCCCTTGTCATATGAGTGAAAGTTACTTCTGGAAAGTCTATTTTGTACTTTTGCATTCAAGGCTTAATAAACAAGATTCAGAGGTTTTGTCTACACCACGGGTCATGGAAGCCAGAGCGACATGGATGCAGGAATTGCACAAACAGACAAAGCCTGAATTTGAAATATTCGGAAGAAGTGATCTCTACTCAAGAGAAAATGTTCAGCATCATGATTCTACTCCCAGCTTATCAGATGACACCTATTCTGATGACATGCCTCACCAGACATACGGATATAGAACAGACTCTTTGTCCGTGAGGGCAGATAATGAGTCTGAGAAGCACACAGTCGAAAGTTCTGGATCACATTTCTCTGATAAGTCAGTTATTGAAGAAAATCCAATTATTAAAAATGTAAACACGGATCTGAAAAGTGGTCGACGGTCTCAAATTATCATTCAAGACTATGGTGATGACGACGACGATGATTGGCCTGAGGATGATTCTGACTTAGGGGGATATGGTGGAACAACACTCCCTATTGTCAATGAAGAAGACATATCTTTCAGCGATCTAGAGGATGATGATTTTGGCATTAAACATGTTAGTGCCAGTCCAGGTTCAGAGGTGGTATAA 1305 0.4314 MSSWLARSLANSLRLDDEGNIENDVVTNPPTPSPRNYPQQNQSQDNAIESQSQHQQQHHHDDDDDDETQGRGVKEDLDEIKQTLTRQFWGMASFLAPPPTTSQSDHTFPRKLEEEHHQRQFDDAVISNPSLDMEQGALREDDPDPNSNTFGSDSDGDRDQEFDIPSAVGITEEVLTFALNIAMHPETWLDFPIDEEDDTDDFYMSEEQQEHALVVERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLNKQDSEVLSTPRVMEARATWMQELHKQTKPEFEIFGRSDLYSRENVQHHDSTPSLSDDTYSDDMPHQTYGYRTDSLSVRADNESEKHTVESSGSHFSDKSVIEENPIIKNVNTDLKSGRRSQIIIQDYGDDDDDDWPEDDSDLGGYGGTTLPIVNEEDISFSDLEDDDFGIKHVSASPGSEVV* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0862 434 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 422 - -
Psa5g0862 434 ProSiteProfiles BSD domain profile. 199 251 IPR005607 -
Psa5g0862 434 SMART wurzfinal6 199 251 IPR005607 -
Psa5g0862 434 MobiDBLite consensus disorder prediction 54 70 - -
Psa5g0862 434 MobiDBLite consensus disorder prediction 94 127 - -
Psa5g0862 434 Pfam BSD domain 199 255 IPR005607 -
Psa5g0862 434 Gene3D BSD domain 164 261 IPR035925 -
Psa5g0862 434 MobiDBLite consensus disorder prediction 13 70 - -
Psa5g0862 434 MobiDBLite consensus disorder prediction 329 344 - -
Psa5g0862 434 MobiDBLite consensus disorder prediction 326 349 - -
Psa5g0862 434 SUPERFAMILY BSD domain-like 169 255 IPR035925 -
Psa5g0862 434 MobiDBLite consensus disorder prediction 37 53 - -
Psa5g0862 434 MobiDBLite consensus disorder prediction 107 122 - -
Psa5g0862 434 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0862 Psa-Chr5 67639593 67644587 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0862 204 249 EF-hand Containing Proteins AT1G69030 41.304 2.00e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0862 - - gmx:100801926 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0862 5 67639593 67644587 Psa5g0862 5 67639593 67644587 ECH