Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0855 ATGAAGGCAGTGTCACATTCCGCTGTTCTTCCTAACCTCAACCGTCACAGATTTTCACTGTCACGTTCTGATGTTCAAATTCCTAACCGTGTCACTTGCCACTCGGATTCTAACAAGTCTATGTCACAAGCATCATTGTTTTTGTCTCCTGGTTCAGCGGATAGAAGAATTGGCAGCAGAAACTTTGTTTGTCGGGTGTTTTCTTCTGTAGATGCAAGCACTTATAATGGGGTTGCTTTAGAATCTTCTTCTCAGACTGCAGAAGAAAAAGTTGGTGTGTTGCTTCTCAACCTAGGTGGACCGGAGACGCTGGACGATGTTCAACCTTTTCTGTTTAATCTGTTTGCTGATCCTGATATCATTCGGCTCCCAAGACTGTTTAGGTTTCTCCAGCGACCATTGGCAAAATTGATATCTACGCTTCGAGCTCCTAAATCCAAGGAAGGGTATGCCTCTATTGGAGGTGGCTCTCCTTTACGCAAAATAACAGATGAGCAGGCACTTGCACTTAAAAACGCTTTGGAAGCGAAGGGTCTCTCTTCAAATCTCTATGTTGGAATGCGCTACTGGTACCCATTCACTGAAGAAGCAGTTCATCAAATTAAGAGGGATCGAATAACGAGGCTCGTGGTGTTACCCCTCTATCCCCAATTTTCTATATCCACTACTGGGTCAAGCATCAGTGTTCTGGAGCAAATGTTCAGGCAAGATTCTTATTTGTCTAGGCTTCCTGTTTCCATTATAAACTCTTGGTATCAAAGAAAAGGTTATCTCAAGTCAATGGCTGATTTAATTGAGAAAGAACTAGAGAGTTTTTCTGAGCCAAAGGAGGCTATGATATTTTTCAGTGCCCACGGTGTACCTGTCAGTTACGTTGAGAATGCTGGGGATCCATACCGAGATCAAATGGAGGAGTGCATCTTCTTGATCATGCAGGAGTTGAAGGCTAGAGGAATTAATAACGAGCACACTCTTGCTTATCAGAGTCGAGTAGGCCCTGTACAGTGGTTAAAACCGTATACAGATGAAGTTCTAGTTGAGCTCGGCAAGAAAGGTGTGAAGAGTCTCTTAGCTGTTCCAGTGAGCTTTGTGAGTGAGCACATAGAGACTCTAGAAGAAATTGACATGGAGTACAGGGAATTGGCTCTTGAATCTGGCATCCAGAATTGGGGACGTGTCCCTGCCCTCGGTCTTACCCCTTCCTTCATTACTGATCTGGCAGATGCAGTAATAGAAGCTCTTCCATCGGCAGCAGCAATATATGCCCCGAACAACAGCAGCTCTGAAGATATGGATGACCCGGTTAAATACTTTGTCAAGATGTTTTTTGGTTCAGTTTTGGCATTCATGTTGTTTTTCTCACCCAAATTGATATCAGCGTTCAGGAATCATGTCATTTAG 1401 0.4368 MKAVSHSAVLPNLNRHRFSLSRSDVQIPNRVTCHSDSNKSMSQASLFLSPGSADRRIGSRNFVCRVFSSVDASTYNGVALESSSQTAEEKVGVLLLNLGGPETLDDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISTLRAPKSKEGYASIGGGSPLRKITDEQALALKNALEAKGLSSNLYVGMRYWYPFTEEAVHQIKRDRITRLVVLPLYPQFSISTTGSSISVLEQMFRQDSYLSRLPVSIINSWYQRKGYLKSMADLIEKELESFSEPKEAMIFFSAHGVPVSYVENAGDPYRDQMEECIFLIMQELKARGINNEHTLAYQSRVGPVQWLKPYTDEVLVELGKKGVKSLLAVPVSFVSEHIETLEEIDMEYRELALESGIQNWGRVPALGLTPSFITDLADAVIEALPSAAAIYAPNNSSSEDMDDPVKYFVKMFFGSVLAFMLFFSPKLISAFRNHVI* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0855 466 SUPERFAMILY Chelatase 89 418 - -
Psa5g0855 466 ProSitePatterns Ferrochelatase signature. 280 299 IPR019772 GO:0004325|GO:0006783
Psa5g0855 466 Gene3D - 90 414 - -
Psa5g0855 466 TIGRFAM hemH: ferrochelatase 88 413 IPR001015 GO:0004325|GO:0006783
Psa5g0855 466 Gene3D - 252 395 - -
Psa5g0855 466 CDD Ferrochelatase_C 261 397 IPR033644 -
Psa5g0855 466 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 33 465 - -
Psa5g0855 466 PANTHER FERROCHELATASE 33 465 IPR001015 GO:0004325|GO:0006783
Psa5g0855 466 CDD Ferrochelatase_N 91 253 IPR033659 -
Psa5g0855 466 Hamap Coproporphyrin III ferrochelatase [cpfC]. 89 414 IPR001015 GO:0004325|GO:0006783
Psa5g0855 466 Pfam Ferrochelatase 90 413 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0855 Psa-Chr5 66760127 66766226 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0855 K01772 - gmx:100813423 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0855 5 66760127 66766226 Psa5g0855 5 66760127 66766226 ECH