Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0828 ATGCCTATTGCAGTTAGTACTGATAAGCCAAAATCTCAACATTATGAATTGCCAACCTCTTTCTTTAAGCTCGTTCTTGGAAACAATCTCAAATACAGTTCTTGTTATTTCTCTTCTGCCTCAAAGACCTTGGAAGATGCTGAAGAAGAAATGCTGAAACTGTATTGCGAGAGATCAAACCTGAAAGATGGTCATACAGTTCTTGACGTCGGATGTGGTTGGGGTTCGCTGACTTTATACATTGCCAAGAATTACAGTAATTCCAGGGTTACAGGAATCTGCAATTCCACAACTCAAAAAGCTTTTATTGAGGAGAAATGCATGGAGTTGCAACTGCAAAATGTGGATATCATTGTTGCGGACATTAGCACATTTGAAATGGAAGTTTCTTACGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAACAAGATATCCAAATGGATGAAAGAGGATGGTCTTTTATTTGTTCATCATTTCTGCCACAAAGCATTTGCCTACCACTTTGAGGACAAAAATGAAGATGATTGGATTACGCGATACTTCTTTACTGGAGGAACTATGCCTGCAGCAAATCTACTTCTTTATTTCCAAGATGACGTTGCTGTCGTCAACCATTGGCTCGTAAATGGGAAACACTACGCGCAGACCAGTGAAGAGTGGCTCAAAAGAATGGATAAGAACATGGCTTCCATCAAGCCAATTATGGAATCGACATACGGCAAAGATTCAGCTACTAAATGGACTGTCTACTGGAGAACATTTTTCATAGCTGTAGCAGAGCTTTTTGGATACAATAATGGTGAAGAATGGATGGTTGTACACTTTCTTTTCAAAAAGAAGTAA 870 0.3839 MPIAVSTDKPKSQHYELPTSFFKLVLGNNLKYSSCYFSSASKTLEDAEEEMLKLYCERSNLKDGHTVLDVGCGWGSLTLYIAKNYSNSRVTGICNSTTQKAFIEEKCMELQLQNVDIIVADISTFEMEVSYDRIFSIEMFEHMKNYKDLLNKISKWMKEDGLLFVHHFCHKAFAYHFEDKNEDDWITRYFFTGGTMPAANLLLYFQDDVAVVNHWLVNGKHYAQTSEEWLKRMDKNMASIKPIMESTYGKDSATKWTVYWRTFFIAVAELFGYNNGEEWMVVHFLFKKK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0828 289 Gene3D Vaccinia Virus protein VP39 5 283 IPR029063 -
Psa5g0828 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 282 IPR029063 -
Psa5g0828 289 Pfam Mycolic acid cyclopropane synthetase 12 260 - -
Psa5g0828 289 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 289 - -
Psa5g0828 289 CDD AdoMet_MTases 66 168 - -
Psa5g0828 289 Coils Coil 44 64 - -
Psa5g0828 289 PANTHER - 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0828 Psa-Chr5 65807533 65810545 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0828 12 260 Acyl Lipid Metabolism Gene Families AT3G23530 27.165 1.35e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0828 - - cam:101505684 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0828 5 65807533 65810545 Psa5g0828 5 65807533 65810545 ECH