Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0823 ATGGATTTCAGGCTAATGGATTTGGATTCTCCACTCTTCAACACTCTCCATCATATAATGGACCTCACCGACGACACAACCGAGAAGAACTTAAACGCTCCAACTCGAACATATGTCCGTGACGCAAAGGCAATGGCTGCAACTCCAGCGGACGTGAAAGAGCATCCAAATTCATACGTGTTTATGGTGGACATGCCTGGGGTGAAATCTGGTGACATAAAGGTTCAGGTGGAAGATGAGAATGTGCTATTGATAAGTGGCGAGAGGAAGAGAGAAGAAGAGAAAGAAGGTGTTAAATATTTGAAGATGGAAAGAAGGATTGGTAAGTTGATGAGGAAATTTGTGTTACCTGAGAATGCGAATATTGAAGCTATCTCTGCTATTTCTCAAGATGGTGTTCTTACGGTTACAGTTAATAAATTGCCTCCACCTGAACCTAAGAAACCAAAAACTATTCAAGTTAAGGTTGCTTGA 474 0.4156 MDFRLMDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0823 157 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 157 IPR002068 -
Psa5g0823 157 Gene3D - 6 156 IPR008978 -
Psa5g0823 157 SUPERFAMILY HSP20-like chaperones 27 149 IPR008978 -
Psa5g0823 157 Pfam Hsp20/alpha crystallin family 51 155 IPR002068 -
Psa5g0823 157 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 7 157 - -
Psa5g0823 157 PANTHER 17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED 7 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0823 Psa-Chr5 65561518 65563224 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0823 K13993 - gmx:111605749 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0823 5 65561518 65563224 Psa5g0823 5 65561518 65563224 ECH