Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0821 ATGGATTTCAGGCTAATGGGTTTGGATTCTCCACTGTTCAACACTCTGCATCACATAAGGGACCTCACCGATGATACTACCGACAAGAATCTAAACGCTCCAACAAGAACATACGTTCGCGACGCAAGAGCAATGGCTGCAACTCCAGCGGACGTGAAAGAGCATCCAAATTCATACGTGTTTGTGGTGGACATGCCTGGGTTGAAATCTGGTGACATAAAGGTTCAGGTGGAAGATGAGAATGTGCTATTGATAAGTGGCGAGAGGAAGAGAGAAGAAGAGAAAGAAGGTGTTAAATATTTGAAGATGGAAAGAAGGGTTGGTAAGTTAATGAGGAAATTTGTGTTACCTGAGAATGCGAATATTGAAGGTATCTCTGCTATTTATCAAGATGGTGTTCTTACTGTTACAGTTAATAAATTGCCTCCACCTGAACCTAAGAAACCAAAAACTATTCAAGTTAAGGTTGCTTGA 474 0.4135 MDFRLMGLDSPLFNTLHHIRDLTDDTTDKNLNAPTRTYVRDARAMAATPADVKEHPNSYVFVVDMPGLKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRVGKLMRKFVLPENANIEGISAIYQDGVLTVTVNKLPPPEPKKPKTIQVKVA* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0821 157 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 41 157 IPR002068 -
Psa5g0821 157 Pfam Hsp20/alpha crystallin family 51 155 IPR002068 -
Psa5g0821 157 Gene3D - 9 156 IPR008978 -
Psa5g0821 157 PANTHER 17.1 KDA CLASS II HEAT SHOCK PROTEIN-LIKE 12 156 - -
Psa5g0821 157 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 156 - -
Psa5g0821 157 SUPERFAMILY HSP20-like chaperones 27 149 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0821 Psa-Chr5 65523921 65525967 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0821 K13993 - pvy:116117493 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0821 5 65523921 65525967 Psa5g0821 5 65523921 65525967 ECH