Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0817 ATGAAAGCGTTCGCAATATCCTCATCATTATTGGCATTGAAAAATTTCAACTTCACCCACACTCGAAACCGAATCTCTAATCCCTTTCTCTCCCCCTTTCTACCTCTCAACTCCAAAATCCACTCTTCCCCTTCTCCAACCATGGCTTCTGCTCCATCATCATCCATCTATTCAGAACTAGCACGTTCACCACCCGCAATTCCCATGCCCACTCCACCTCTCACCAAGTTCAACATTGGTCTCTGTCAACTCTCAGTAACCTCCGATAAAGACCGAAACATCGCTCACGCTCGCACTGCTATTCAAGACGCTGCTTCAAAGGGGGCTAACCTTGTTCTTTTGCCTGAAATTTGGAATAGTCCTTATGCAAATGAGAGTTTCCCTGTTTATGCTGAGGATATTGATGCTGGTGGTGATGCTTCTCCTTCTACTGCTATGTTGTCTGAACTTGCTCGTTTGCTGAAAATTACTATTGTTGGTGGTTCTATTCCTGAACGCTCTGGAGGTCGCGTGTATAACACTTGCTGTGTGTTTGGGACTGATGGAAAACTCTTGGCAAAGCACCGGAAGATACATCTGTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCATTGACTCTCACTGCCGGGGAGACTCCAACAGTTGTTGACACAGAGGTTGGACGCATTGGCATAGGCATTTGTTATGACATTAGGTTTCCAGAGCTAGCAATGATATATGCAGCAAGAGGTGCACACTTGATCTGCTATCCTGGGGCTTTTAACATGACAACTGGACCATTACATTGGGAGTTATTGCAGAGATCAAGGGCTACAGATAATCAGCTATATGTGGCAACCTGTTCACCTGCTCGGGATAATGGACCTGGTTACGTGGCTTGGGGTCACTCCACTCTTGTTGGTCCGTTTGGAGAAGTTCTGGCTACCACAGAACACGAGGAGGAAATCATTATAGCAGAAATTGATTATTCAATATTGGAGCCGAGAAGGACAAATCTCCCTGTGACTAAGCAACGAAGGGGTGATCTTTACCAGTTGGTAGATTTGCAGAGGCTGAATTCCCACTGA 1077 0.4531 MKAFAISSSLLALKNFNFTHTRNRISNPFLSPFLPLNSKIHSSPSPTMASAPSSSIYSELARSPPAIPMPTPPLTKFNIGLCQLSVTSDKDRNIAHARTAIQDAASKGANLVLLPEIWNSPYANESFPVYAEDIDAGGDASPSTAMLSELARLLKITIVGGSIPERSGGRVYNTCCVFGTDGKLLAKHRKIHLFDIDIPGKITFIESLTLTAGETPTVVDTEVGRIGIGICYDIRFPELAMIYAARGAHLICYPGAFNMTTGPLHWELLQRSRATDNQLYVATCSPARDNGPGYVAWGHSTLVGPFGEVLATTEHEEEIIIAEIDYSILEPRRTNLPVTKQRRGDLYQLVDLQRLNSH* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0817 358 CDD nit 79 343 IPR045254 GO:0016811
Psa5g0817 358 Pfam Carbon-nitrogen hydrolase 79 327 IPR003010 GO:0006807
Psa5g0817 358 Gene3D - 75 352 IPR036526 -
Psa5g0817 358 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 45 357 - -
Psa5g0817 358 SUPERFAMILY Carbon-nitrogen hydrolase 76 350 IPR036526 -
Psa5g0817 358 PANTHER NITRILASE-RELATED 45 357 - -
Psa5g0817 358 ProSitePatterns Uncharacterized protein family UPF0012 signature. 227 247 IPR001110 -
Psa5g0817 358 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 77 326 IPR003010 GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0817 Psa-Chr5 65427652 65433357 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0817 K13566 - gmx:100817195 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0817 5 65427652 65433357 Psa5g0817 5 65427652 65433357 ECH