Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0754 ATGATTGCAATTCCTGATTTTGCTGCTGGAGCCATGGAGAATTATGGTTTGGTTACATACCGGGAGACTGCTTTGCTCTATGATGATCAGCATTCTGCTGCTGCTAACAAACAGAGGGTTGCAATTGTTGTAGCTCATGAACTAGCACATCAATGGTTTGGCAATCTTGTTACAATGGAGTGGTGGACCCATTTATGGCTGAATGAAGGTTTTGCAACATGGGTGAGTTATTTAGCTGCTGATGGCTTGTTTCCTGAGTGGAAAATATGGTCTCAATTTCTTCATGAAAGTGAGGCAGGTCTTAGACTAGATGGGCTTGCCGGATCCCACCCAATTGAGGTGGAATTAAATCATGCTCGGTGA 363 0.438 MIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVAIVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADGLFPEWKIWSQFLHESEAGLRLDGLAGSHPIEVELNHAR* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0754 120 PANTHER AMINOPEPTIDASE M1-A 1 119 - -
Psa5g0754 120 PRINTS Membrane alanyl dipeptidase (M1) family signature 7 17 IPR001930 GO:0006508
Psa5g0754 120 PRINTS Membrane alanyl dipeptidase (M1) family signature 43 58 IPR001930 GO:0006508
Psa5g0754 120 PRINTS Membrane alanyl dipeptidase (M1) family signature 62 74 IPR001930 GO:0006508
Psa5g0754 120 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 1 116 - -
Psa5g0754 120 Gene3D Neutral Protease Domain 2 1 120 IPR027268 -
Psa5g0754 120 Pfam Peptidase family M1 domain 1 119 IPR014782 GO:0008237|GO:0008270
Psa5g0754 120 PANTHER PROTEASE M1 ZINC METALLOPROTEASE 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0754 Psa-Chr5 61662735 61663641 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0754 K08776 - twl:119996571 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0754 5 61662735 61663641 Psa5g0754 5 61662735 61663641 ECH