Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0743 ATGTCGGATTTAACGAAGGATTTATCAAAAGATTTATCGAAAGGTGATTCGGTTCAAATCAGAGAGGTTTGGAACGATAATCTCGAAGAGGAATTTGCTTTGATCCGTGAAATCGTTGATGATTTTAACTATGTAGCTATGGATACAGAGTTTCCAGGTGTTGTTCTTCGTCCTGTAGGGGTTTTCAAACATATCAATGATTTTAACTACCAGACTTTGAAGGATAACGTTGATATGTTGAAGCTGATTCAGTTAGGTTTAACTTTCTCTGATGAGAATGGGAAGTTACCTACTTGTGGCACTGGAAATCCTTGCATCTGGCAATTTAATTTCCGTGAGTTTAACGTCACCGAAGATATATTCGCTGCTGATTCGGTCGAGCTTTTGCATCAATGTGGAATTGATTTCACTAAGAACAGCGAGCAAGGGATCGACGTGAACCGATTCGGCGAGCTTCTTATGTCGTCTGGGGTTGTGTTAAACGATAACATGCAATGGGTTACTTTCCATAGTGGATATGATTTTGGTTATCTGCTGAAGCTTTTGACTTGCAGAACTTTGCCAGATACGCAAACAGGGTTCTTCGATTTGATCAACATTTATTTTCCGATGCTTTATGATATCAAACATTTGATGAAATTCTGTAACAGTCTTCATGGTGGTTTGAACAAGCTTGCAGAGTTGTTGGAAGTTGAAAGGATTGGTGTTTGCCATCAAGCAGGATCGGATAGTTTACTCACTGCTTGTGCATTTAGAAAATTGAGGGATACGTTCTTCAATGGCGAAACAGAGAAATACTCTGGTGTGTTGTATGGATTAGGTGTTGAGACAGACTAA 837 0.3931 MSDLTKDLSKDLSKGDSVQIREVWNDNLEEEFALIREIVDDFNYVAMDTEFPGVVLRPVGVFKHINDFNYQTLKDNVDMLKLIQLGLTFSDENGKLPTCGTGNPCIWQFNFREFNVTEDIFAADSVELLHQCGIDFTKNSEQGIDVNRFGELLMSSGVVLNDNMQWVTFHSGYDFGYLLKLLTCRTLPDTQTGFFDLINIYFPMLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACAFRKLRDTFFNGETEKYSGVLYGLGVETD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0743 278 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 12 277 IPR039637 GO:0004535|GO:0030014
Psa5g0743 278 SUPERFAMILY Ribonuclease H-like 20 273 IPR012337 -
Psa5g0743 278 Gene3D - 8 276 IPR036397 GO:0003676
Psa5g0743 278 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 12 277 - -
Psa5g0743 278 Pfam CAF1 family ribonuclease 23 144 IPR006941 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0743 Psa-Chr5 60288328 60291110 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0743 K12581 - gmx:100785970 499.204