Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0717 ATGTATAGGGTAGCAAAAGCATCAGAGTACCTTGTGATAACCGGAGTCGGAATCCAAGACATCAAGCTTGCAAAGAAAGCATGGATTCTTCCCGGACAATCTTACACCGTCTTCGACCTTTCTCCGGTGAACTACACCTTCGAAGTTCAAGCTATGAGTGCCGAGAAACTCCCTTTTGTTCTCCCTGCCGTATTCACAATCGGTCCTCGCGCCGACGATCACGAAAGTCTCCTCAAATACGCCAAACTCATTTCACCACATGATAAGCTCTCTAATCATGTTAACGAACTCGTTCAAGGAATCATCGAAGGCGAGACACGTGTTCTCGTTGCTTCAATGACAATGGAAGAGGTTTTCAGAGGAACAAAAGAATTTAAACGAGAAGTATTCGAGAAAGTTCAACTTGAACTTAACCAATTTGGATTACTGATTTACAATGCAAATGTTAAACAATTGGTTGATGTTCCCGGTCATGAGTATTTCTCATATTTAGGGCAAAAGACGCAAATGGAAGCAGCGAATCAAGCTAAGGTTGACGTGGCAGAAGCTACCATGAAAGGAGAGATTGGTTCGAAAATGCGAAAAGGGCAAACACTGCAGAATGCAGCGAAAATTGATGCGGAGACGAAGGTTATTGCCGTGCAGAGAAATGGAGAGGGTGAAAAGGAAGGAATTAAAGTGAGGAGTGAAGTAAAGGTTTTTGAGAATGAGAGAGAAGCTGAAGTGGCTCAGGCTAATTCTGAGTTGGCTAAGAAGAAAGCGGCTTGGACTAAGGCGGCTCAAGTGGCTGAAGTTGAAGCTGCTAAAGCTGTGGCTCTTAGGGAAGCTGAGTTGCAAGGTGAGGTGGAGAAGATGAATGCTTTGACAACTACTGAGAAGCTTAAAGCTGAGTTTCTAAGTAAAGCAAGTGTTCAATATGAAACCAAGGTACAAGAAGCAAACTGGGAGCTGTACAAGAAACAAAAAGAGGCAGAAGCAATTCTATATGAGAAGAAGACGGAGGCAGAAGCACAGATAGCATTGGCAGACGCAACATTTTATGCTAGAAAGCAAGTAGCTGAAGCAGATTTATATGCAAAGCAGAAGGAAGCAGAGGGGATTGTGACACTTGGGCAATCTCAAGGAGTGTATATAAGTACACTTCTGACTGCCCTTGAAGGCAACTACACAGCTCTAAGGGACTATTTGATGATAAATGGTGGCATGTTTCAAGAGATTGCAAAGATTAATGCTGAGGCAATTCGTGGACTTAAGCCGAAGATTAGTATATGGAGCAATGGTGGTGATAATAATGGAGGAATAACAGAAGGTGGGATGGGTATGAAAGATCTTGCTGGTGTGTACAAGATGTTACCACCTCTGTTTAAGACTGTTCATGAGCAAACAGGAATGTTGCCTCCTTCTTGGATGGGAGTCTTACCTAACAAAAGCTCTTAA 1437 0.4301 MYRVAKASEYLVITGVGIQDIKLAKKAWILPGQSYTVFDLSPVNYTFEVQAMSAEKLPFVLPAVFTIGPRADDHESLLKYAKLISPHDKLSNHVNELVQGIIEGETRVLVASMTMEEVFRGTKEFKREVFEKVQLELNQFGLLIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEATMKGEIGSKMRKGQTLQNAAKIDAETKVIAVQRNGEGEKEGIKVRSEVKVFENEREAEVAQANSELAKKKAAWTKAAQVAEVEAAKAVALREAELQGEVEKMNALTTTEKLKAEFLSKASVQYETKVQEANWELYKKQKEAEAILYEKKTEAEAQIALADATFYARKQVAEADLYAKQKEAEGIVTLGQSQGVYISTLLTALEGNYTALRDYLMINGGMFQEIAKINAEAIRGLKPKISIWSNGGDNNGGITEGGMGMKDLAGVYKMLPPLFKTVHEQTGMLPPSWMGVLPNKSS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0717 478 Pfam SPFH domain / Band 7 family 9 183 IPR001107 -
Psa5g0717 478 Gene3D Band 7 domain 38 155 IPR036013 -
Psa5g0717 478 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Psa5g0717 478 PANTHER FLOTILLIN-RELATED 2 473 IPR027705 -
Psa5g0717 478 PANTHER FLOTILLIN-LIKE PROTEIN 3 2 473 - -
Psa5g0717 478 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0717 Psa-Chr5 57276441 57278046 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0717 K07192 - dcr:108226889 745.347