Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0684 ATGGCTTTCAACAAATTCTCTTTAGTAGTTTTAGTGCTTTCTCTTCTTTCCTACTCAACATTCACTGATGCTAATGGTTGTCCACCATCACCAAATCCAAAACCTTCACCCGCTGCTTCTCCACCGTCTTCCCAAAGTTCCTGCCCTAAGGACACCTTAAAGTTAGGGGTTTGTGCCGACCTATTAGGGTTGGTTAATATTGTTATCGGAGACCCTCCTTCGGGTAGTACTTGTTGCGCATTGATCAAAGGTTTGGCTGACTTGGAAGCCGCAATATGTCTTTGTACCGCACTTAAGGGCAATGTGCTTGGAATCAACTTGAATGTGCCTATCGCGCTCAGTTTGATCCTTAGTGCTTGTCAGAAAACCGTTCCTTCTGATTTTCAATGCGTCTAA 396 0.4419 MAFNKFSLVVLVLSLLSYSTFTDANGCPPSPNPKPSPAASPPSSQSSCPKDTLKLGVCADLLGLVNIVIGDPPSGSTCCALIKGLADLEAAICLCTALKGNVLGINLNVPIALSLILSACQKTVPSDFQCV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0684 131 PANTHER LIPID TRANSFER PROTEIN 26 130 - -
Psa5g0684 131 SMART aai_6 48 130 IPR016140 -
Psa5g0684 131 PANTHER - 26 130 - -
Psa5g0684 131 CDD HPS_like 51 130 IPR027923 -
Psa5g0684 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 130 IPR036312 -
Psa5g0684 131 Pfam Hydrophobic seed protein 48 130 IPR027923 -
Psa5g0684 131 Gene3D - 45 131 IPR036312 -
Psa5g0684 131 MobiDBLite consensus disorder prediction 28 42 - -
Psa5g0684 131 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0684 Psa-Chr5 56155830 56156850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0684 40 130 Acyl Lipid Metabolism Gene Families AT4G22490 35.165 1.64e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0684 - - mtr:MTR_3g106750 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0684 5 56155830 56156850 Psa5g0684 5 56155830 56156850 ECH
Psa6g0663 6 22671798 22673460 Psa5g0684 5 56155830 56156850 PCT