Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0682 ATGCAGAGACGAAGTCCTCCCAAGCATAGACACGATGGGACTTCGCCGCTGCCTCTTGGCATGGATTGGAGTCCTGCACCTCGAAAATGGAATGGACGGGAAACGGAATGGCCACACAATCATCGTACCGGTTGGAGTTATTGTGTCTTAATACCTTCTTGGGTCTTCGTGCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGCTTCAAGTTGGTATACAATCACCAGAAGGGATTACGAATATCCACGGAGTACTAAGAAGGTTCAATGATTTTATAAAGTTGTATGTTGATCTTAAAAAGGAGTTCCCCGGGAAAAATATCCCTCCAGCGCCACCCAAGGGACTCTTGCGATTGAAAAGTCGAGCTTTGTTGGAAGAGAGAAGGCGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGATATCTCAAGATGTGCTCCTGTTGCATCATTTCTTGAGCTAGAAACTGCTGCTAGATCTTCATTTCAAGATGCAAGCCAGCAGAATTCAGTAACAGATCATGATTCTAATAACAGAGATTATTCGGTGCAACCATCTCTCCTTTCGAGCTTATCATTAGCTGCTGGAAGTTCATCTGTTGCGTCAGATTATGGTAGTGATACTCCATATGATGTATCGGAAGTAGGAACTCCGAGAATTGGACGGGATGATAATTCTGAAGTTGGGACAGATGATCTGACATTAGATGAAGATATGACAAACCCAATAGAAAGGCTTGTAAAGTATGGCATATCAAATATTGACGAGGGTTTGTTTATGGGTCAGACTATTTTAGAGCAATTAGAAGGACTTCCTAGGCATAAAGTAAATGCCAGACATATGAACAATGTTGCAGGGAAGGACAGAAGTAATGGTAATTCGTATGATTCTTCACTTCTAGCTAACAATACCATGGAACGTTTCTCTGAGCCCGGACATGCTAAAGCTTTTGGTCACATTCGTAAGCTTTCAAATGAGAGTGTTGGAAGTGATGGAAGCTCAATACGAGGTAGTGACATGTCTAATTTTGGGATACCAAATTCATCTGGTGATGGCTCTGTCGACCTTCCTGGATGTGCCTCAGTTTCGAGAGAAACAGATATTGCGGGCCACAAGTCGAAGTGTGCCGGCGATGCTCAATTAGTCCTCCCGCTAGATCAACGCAATAAACTGAACAGGATTCTTTCAACCATGCAGAGAAGGCTATTCACAGCGAAAACTGATATGGAGGACCTTATAGTTAGATTAAATCAAGAAATAGCGGCAAAGGATTTTCTTACAACAAAGGTTAAGGATGTGGAAGTTGAACTTGAAACTACCAAACAAAAAAATAAGGAGAACTTGCAGCAGGCTATTCTGATCGAGAGGGAAAGATTTACCCAAATGCAGTGGGATATGGAGGAACTTAGACGAAAGTCACTGGAAATGGAGATGAAACTTAAGTCTGAATCAGATGGAAATGCTGGTCAGAATTTGACAAAGAAATCAATTGTCCATCAGAACGATGTGCTGTTGCAGGATTTAGATGTTGCCAGGGAGCAGCTGGAAATTTTGTCAAAACAGTATCTAGAGCTAGAAGCAAAATCCAAAGCAGATATTAAAGTTCTGGTTAAAGAGGTTAAATCTCTCCGTAGTTCCCAAACAGATTTGAAGAAGGAACTTAGTGAGTCCATAAAGGAGAAACTTGAAGCGGAGAAACTACTACTTCATGAAAGAGAGAAAAGGGAACAAGCAGAAACAGCTTCTAGAGAATTGCTTGAGAAATGTGGCCTTCTTTTTAAGCAGCTTCAAGAATGCAATGTCGATCTTCCTTTCAATGACGAGAATAGGACAGTCTTGCATTCATCAACATCAACTGATGCTTTTAATCTATTAAAGACATCTGATGACCAAATCAACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTACGGAAATGCAGCTTTTATCGGGGAAAAAACCAATGTCATACAAGATGGTGCAATCTGTGGTGATGAAATGAGAAAGATCATAGCAGATTTGTTCGTTGATAATGTTAGATTGAGAAAACAAACAAACCAGATTACAAGGCATGCGCTCAAATTGGATATGACAACAAGCGTTGTTTCTCCTTCAATTGAAAATGTAACAAATAGTTAG 2160 0.4079 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRETEWPHNHRTGWSYCVLIPSWVFVPKSRNSDPIVFYRLQVGIQSPEGITNIHGVLRRFNDFIKLYVDLKKEFPGKNIPPAPPKGLLRLKSRALLEERRRSLEEWITKLLSDIDISRCAPVASFLELETAARSSFQDASQQNSVTDHDSNNRDYSVQPSLLSSLSLAAGSSSVASDYGSDTPYDVSEVGTPRIGRDDNSEVGTDDLTLDEDMTNPIERLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHMNNVAGKDRSNGNSYDSSLLANNTMERFSEPGHAKAFGHIRKLSNESVGSDGSSIRGSDMSNFGIPNSSGDGSVDLPGCASVSRETDIAGHKSKCAGDAQLVLPLDQRNKLNRILSTMQRRLFTAKTDMEDLIVRLNQEIAAKDFLTTKVKDVEVELETTKQKNKENLQQAILIERERFTQMQWDMEELRRKSLEMEMKLKSESDGNAGQNLTKKSIVHQNDVLLQDLDVAREQLEILSKQYLELEAKSKADIKVLVKEVKSLRSSQTDLKKELSESIKEKLEAEKLLLHEREKREQAETASRELLEKCGLLFKQLQECNVDLPFNDENRTVLHSSTSTDAFNLLKTSDDQINILLAEVENLEKDYGNAAFIGEKTNVIQDGAICGDEMRKIIADLFVDNVRLRKQTNQITRHALKLDMTTSVVSPSIENVTNS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0682 719 Coils Coil 564 584 - -
Psa5g0682 719 SMART PX_2 55 160 IPR001683 GO:0035091
Psa5g0682 719 MobiDBLite consensus disorder prediction 1 25 - -
Psa5g0682 719 Gene3D - 54 187 IPR036871 GO:0035091
Psa5g0682 719 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Psa5g0682 719 Pfam PX domain 86 158 IPR001683 GO:0035091
Psa5g0682 719 Coils Coil 630 650 - -
Psa5g0682 719 MobiDBLite consensus disorder prediction 207 238 - -
Psa5g0682 719 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 708 - -
Psa5g0682 719 Coils Coil 428 455 - -
Psa5g0682 719 Coils Coil 506 533 - -
Psa5g0682 719 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Psa5g0682 719 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 708 IPR044588 GO:0015031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0682 Psa-Chr5 56062972 56070846 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0682 - - gmx:100792151 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0682 5 56062972 56070846 Psa5g0682 5 56062972 56070846 ECH