Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0668 ATGAAAATATTAAACCTTGTAATAATTTCAAGCCTATTGCTCAAACAAATGACGACCCTAATTCTCGCAGATGTTGGTACTGCTGCTTCTTACGGACCTCCGTACATACCTACTTCTTGTGATGGAAGTAGGAGAGAGCAGTTTCCTCCCGGTAACATGTTTGTGGCAGTGAATGAAGGGTTATGGGATAATGGTGCAGCATGTGGGAGAAGATACAGAGTGAGATGTGTGAGTGGAATGAATAAGCCATGCAAAGGTGGTAGTATTGATGTTAAAGTTGTTGATTCTATTACTTCTTGTACAAAGTCTTCATGCCCCCACACTTTTCATATGTCAACGGAAGCATTTGCAGCTATCTCACGTTTCCTTAATGCAAATATCAATATTGAATATATTCAGATATGA 405 0.3926 MKILNLVIISSLLLKQMTTLILADVGTAASYGPPYIPTSCDGSRREQFPPGNMFVAVNEGLWDNGAACGRRYRVRCVSGMNKPCKGGSIDVKVVDSITSCTKSSCPHTFHMSTEAFAAISRFLNANINIEYIQI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0668 134 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 134 IPR007112 -
Psa5g0668 134 Gene3D - 24 134 IPR036908 -
Psa5g0668 134 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 2 133 - -
Psa5g0668 134 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 2 133 - -
Psa5g0668 134 SUPERFAMILY Barwin-like endoglucanases 18 131 IPR036908 -
Psa5g0668 134 Pfam Lytic transglycolase 56 131 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0668 Psa-Chr5 53406826 53407821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0668 - - mtr:MTR_3g107500 234.572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0668 5 53406826 53407821 Psa5g0668 5 53406826 53407821 ECH