Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0634 ATGTCTTGCTTCCAACATTTAATCATCATCCTCTTCTCATCATTGTTCCTCCACTTCTCTCAAGCTGACGTTGGCACTGCTTCCCACTATGGTCCTCCCTTTTTACCGACGGAGTGTTTCGGGGAAGGAGCGTCGCAGTTTCCGTCGACCAACATGTTTGGTTCGGCTGGAGAGGGTATATGGAACAATGGTGCAGCATGTGGGAGGGTGTACGAGGTGAGATGCATCAGTGCTGCTGTTCCAAGAACTTGCATTCCTGGTCAAGCGGTTCAGATTAAGATTGTTGACAGAGCACAATCGTCTGTTTCTAGGCCTTCAACGGATGATACTTCCATGGTTCTTTCCATCACTGCTTTTCAAGTCATTGCAAACGTTTCTTCACCATTGATTAACATTGAATTCCAACAGGTTTGA 414 0.4638 MSCFQHLIIILFSSLFLHFSQADVGTASHYGPPFLPTECFGEGASQFPSTNMFGSAGEGIWNNGAACGRVYEVRCISAAVPRTCIPGQAVQIKIVDRAQSSVSRPSTDDTSMVLSITAFQVIANVSSPLINIEFQQV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0634 137 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 25 137 IPR007112 -
Psa5g0634 137 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 6 137 - -
Psa5g0634 137 Pfam Lytic transglycolase 60 133 IPR009009 -
Psa5g0634 137 Gene3D - 20 137 IPR036908 -
Psa5g0634 137 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 6 137 - -
Psa5g0634 137 SUPERFAMILY Barwin-like endoglucanases 11 137 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0634 Psa-Chr5 50345356 50346952 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0634 - - gmx:100803494 207.223