Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0633 ATGGATAGTGAGAGTGGAATTCCAATTTTAGATTTTCGAAAGAGCAGTGGAGTGACATTAGAAGAAGGAAGTGAAGGATGGAAAGAAATGAGTAAGAAAGTGCGAGAAGCATTTGAGAATCACGGTGCTTTTCTTTTAAGATGCGATGAAATACCGAATGAATTACGAGAAGAAATGTTCACAGGCATGAAATCTTTGTTTGAACTACCTGAAGAGACAAAGTTGAAGTTCTCTAGCACAAGAGCATATAGGGGTTACACTGCTAAGAGTCATGTTATTCCTCATTGTCAGAGTTTTGGAATTGACGACGCTCTTAAGTCAGATACATCTCAGAATTTCACTAACCTCATGTGGCCGGAAGGAAATCTAACATTCAGTGAGACACTGAGTTCTTTGACCTCAAAAACAAGAGAATTAAGCAGGCTTATCTTAAAGATGGTTGTGGAGGGTTTTGGTCTTCCAGAAGAATATATTGCGGAAGTTGAAGAGTTGAATAGCCACAATGATTCACGAATGACAAGGTATCAACTTCCTGAAGAAAACAAGGATTCTGAAATTGCTTTAGTGCCTCACACTGACAAAGGCACCTTAGCCCTAATATGCCACAACGAAGTCCAAGGTTTGCAGGTTTTACCAAACTCGGGAAATTGGGTTAATGTCAACATTCCTCCTAATGGTTTTATTGTGATTGTTGGTGACATGTTGAAGGCATGGAGTAATGGGAGACTCCAAGCACCAACACACAGAGTGGTGACAAGAGGAGACAAAGAGAGATTGGCATTCATTCTTTTTGCTGTGCCAAAGCAAGAAACACTTATTAAGGTGCCATCGGAGTTGGTAGATGAAGATCACCCTCTTCGTTACAAGCCATTCAAGTACGAGGAGTTTGTAGATTTTCATTATACAACTCGCACCGAAAAGGGAGTACTTGAACAAGTTGCTGGAGTTTGA 951 0.4038 MDSESGIPILDFRKSSGVTLEEGSEGWKEMSKKVREAFENHGAFLLRCDEIPNELREEMFTGMKSLFELPEETKLKFSSTRAYRGYTAKSHVIPHCQSFGIDDALKSDTSQNFTNLMWPEGNLTFSETLSSLTSKTRELSRLILKMVVEGFGLPEEYIAEVEELNSHNDSRMTRYQLPEENKDSEIALVPHTDKGTLALICHNEVQGLQVLPNSGNWVNVNIPPNGFIVIVGDMLKAWSNGRLQAPTHRVVTRGDKERLAFILFAVPKQETLIKVPSELVDEDHPLRYKPFKYEEFVDFHYTTRTEKGVLEQVAGV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0633 316 Gene3D - 1 308 IPR027443 -
Psa5g0633 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 267 IPR005123 -
Psa5g0633 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 7 89 IPR026992 -
Psa5g0633 316 Pfam 2OG-Fe(II) oxygenase superfamily 170 264 IPR044861 -
Psa5g0633 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 314 - -
Psa5g0633 316 SUPERFAMILY Clavaminate synthase-like 4 304 - -
Psa5g0633 316 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 3 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0633 Psa-Chr5 50292083 50293635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0633 3 301 Glycosyltransferase AT5G59530 24.430 1.38e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0633 - - mtr:MTR_4g021380 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0633 5 50292083 50293635 Psa5g0633 5 50292083 50293635 ECH