Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0595 ATGTTGTCTTTCTCTTCAATTAATTGTATTGACATAACAAAAATTTTGGGACAAAACCCAGAATTCTCAACTTTCAACAAATACCTAACCGAAACCAAGTTGGCTGAACAAATTAACACTGCTAAAGCCGTTACAATTCTCGCCCTGGATAACACCGATATCGCTTGTCTCTCTGGTAAATCACCCGACGCCGTTAAAATCGTTATTGGAACCCATATTGTAACTGATTTCTACGATGAGAAAAAACTCTTTGAAGCCATAGGTAGCCACGCAGAATTAGCTACGCTTTCACCGGCTTCCGGCTTAGCCGCGAAGATCTACGTAGCACTTATTAATGAAGGTGAGGTGGCATTTGGTTCCGCTATTGCTGGTTCAACTTTTGATACCAAGCTTGTTAGAACCGTAACAACTGAAGCTGGAGTCATTTCGGTTCTTCAGGTTACTCAACCTATTGTTAAGATTGTTGATTCAGCTCCGGTGAAGACAACACCAGAGCTACCTTCTGTTACTGATGGAAAGGTTGTTTCACCCGCCACAAATGTGGTGGGTGAGTCACCTAAGAGTGTTGTTGCTGTTGCACCTGCTCCTAGTGCTTCTTCCCGTACCACGTTTGGGTTCATTGGTGTTGTTATGGCCTTTGCTTCTATTTTTGTCTCATTCTTGTTACTTGGTGCCTACTTCTGGACCTTTCATTGCGGACCTTGGGAGGATCCTGAAACAATTAATATCAGTTTGAAATGCAATTGA 747 0.4244 MLSFSSINCIDITKILGQNPEFSTFNKYLTETKLAEQINTAKAVTILALDNTDIACLSGKSPDAVKIVIGTHIVTDFYDEKKLFEAIGSHAELATLSPASGLAAKIYVALINEGEVAFGSAIAGSTFDTKLVRTVTTEAGVISVLQVTQPIVKIVDSAPVKTTPELPSVTDGKVVSPATNVVGESPKSVVAVAPAPSASSRTTFGFIGVVMAFASIFVSFLLLGAYFWTFHCGPWEDPETINISLKCN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0595 248 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 2 197 - -
Psa5g0595 248 ProSiteProfiles FAS1/BIgH3 domain profile. 9 159 IPR000782 -
Psa5g0595 248 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 197 IPR033254 -
Psa5g0595 248 Gene3D FAS1 domain 9 159 IPR036378 -
Psa5g0595 248 SUPERFAMILY FAS1 domain 15 106 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0595 Psa-Chr5 47646949 47648334 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0595 - - mtr:MTR_3g108760 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0595 5 47646949 47648334 Psa5g0595 5 47646949 47648334 ECH