Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0587 ATGGCAATTACACTTCCTTTTCTTCCTCTAACAACCTCTTTCAATTCATCCAAATCCACTCTATCATCCATTCTCACCAATACAACAGCACGATATCACTTCTCAACCATCGCCATGAACTCCTTCACCACCACCACGTCAGCATCTTCTTCCTCAATGCAGTACGTGCCAGAGCAAGACTCTAACGAAATGGAACGTGTTGCGAACCTAACTTTTCAAAGGTACACTTCTAATAGCACCAAGAGGAGTGGTAAAGGTACGGCAATAGTTTGGTTTAGAAACGATCTCAGAGTTTTGGATAATGAGGCTCTGTACAAAGCTTGGCTTTCTTCTCAAACTCTATTGCCTGTTTACTGTGTTGATCCTCGACTCTTTGCCACTACTTACCATTTCGGATTTCAAAAAACTGGAGCATTGAGAGCACAGTTTGTACTAGAGTGTTTGGCTGACTTGAGGAAGAATCTAATGAATCGGGGACTTAATTTGCTTATTCAACTTGGGAAGCCTGAAGATATTATACCTTCTCTAGCTAAAGCTTATGGAGCTCATACAGTTTATGCACAGAAAGAAACTTGCAGTGAGGAGTTGAATGTTGAAAGGTCTGTTAGCAGATGTCTTCAGCAAGTGGGGGTATCATCGGATGAATCTGCCGGGGATGCAAGAACTTCAAACAGCCACCCCAAGTTACAGTTTGTTTGGGGAACCACCATGTACCACCGAGATGATCTTCCATTTGATGTCACTTGTTTGCCGGATGTTTATACTCAATTTCGTAAGACTGTCGAAGCCAAATGTGCTGTGCGCTCGTCCATCAAACTGCCATCATCACTTGGACCTTCTCCCCCTATTGAGGATTGGGGATGTCTTCCTTCATTGGAGCAGCTGGGACTTTGCTCACAGAATGTTAGCAAGGGGATGAAATTTGTGGGGGGTGAAACTGCCGGATTGAGCAGAATATATGACTACTTTTGGAAGAAGGATTTAATAAAGGTATACAAAGAGACCCGAAATGGGATGTTAGGGTCTGATTATTCTACCAAATTCTCACCATGGCTTGCATCCGGAAGCTTGTCACCTCGTCTCATACACGATGAGGTGAAGAGATATGAGAATGAAAGACAAGCAAACAGTTCTACCTACTGGGTTTTGTTCGAGTTGATATGGAGGGATTATTTTCGATTTCTATCAGTCAAATATGGAAATTTACTTTTCCATATCGGTGGACCCAGGAATGTTCAGCGTAATTGGAGCCAAGACAAGAAATTATTTGAATCCTGGCGAGATGGTTGTACAGGGTATCCTCTGATAGATGCTAACATGAAAGAACTATCAACTACAGGTTTCATGTCAAATCGTGGGCGGCAGATTGTGTGTTCCTTCCTAGTTCGTGACATGGGCATAGATTGGCGCATGGGAGCAGAATGGTTTGAGACGTGTCTCTTGGATTATGATCCGTGTTCTAATTACGGGAACTGGACTTACGGATCAGGAGTTGGGAATGATCCTAGGGAAGACCGTTATTTCAGCATACCGAAACAAGCACAAACATATGACCCAGAAGGTGAATATGTTGCATACTGGTTGCCTCGGTTACTAACAATCCCAAGAGAAAAAAGGAATTTTCCTGGTAGTTTATACATTCGTCAAATTGTGCCTCTTAAGTTTGGAACAACTGGGAGACACAATAAGGAGGAGACTTCACTTGGTGGAGCAAGAAGAAGAAATGATCGAAGATGGAATAGGAATTAG 1749 0.4277 MAITLPFLPLTTSFNSSKSTLSSILTNTTARYHFSTIAMNSFTTTTSASSSSMQYVPEQDSNEMERVANLTFQRYTSNSTKRSGKGTAIVWFRNDLRVLDNEALYKAWLSSQTLLPVYCVDPRLFATTYHFGFQKTGALRAQFVLECLADLRKNLMNRGLNLLIQLGKPEDIIPSLAKAYGAHTVYAQKETCSEELNVERSVSRCLQQVGVSSDESAGDARTSNSHPKLQFVWGTTMYHRDDLPFDVTCLPDVYTQFRKTVEAKCAVRSSIKLPSSLGPSPPIEDWGCLPSLEQLGLCSQNVSKGMKFVGGETAGLSRIYDYFWKKDLIKVYKETRNGMLGSDYSTKFSPWLASGSLSPRLIHDEVKRYENERQANSSTYWVLFELIWRDYFRFLSVKYGNLLFHIGGPRNVQRNWSQDKKLFESWRDGCTGYPLIDANMKELSTTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDPCSNYGNWTYGSGVGNDPREDRYFSIPKQAQTYDPEGEYVAYWLPRLLTIPREKRNFPGSLYIRQIVPLKFGTTGRHNKEETSLGGARRRNDRRWNRN* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0587 582 Gene3D HUPs 50 234 IPR014729 -
Psa5g0587 582 PANTHER CRYPTOCHROME 72 562 IPR002081 -
Psa5g0587 582 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 405 559 - -
Psa5g0587 582 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 85 283 IPR036155 -
Psa5g0587 582 Pfam DNA photolyase 88 266 IPR006050 -
Psa5g0587 582 Pfam FAD binding domain of DNA photolyase 384 538 IPR005101 -
Psa5g0587 582 PANTHER CRYPTOCHROME DASH 72 562 - -
Psa5g0587 582 Gene3D - 235 404 - -
Psa5g0587 582 PRINTS DNA photolyase signature 431 447 IPR002081 -
Psa5g0587 582 PRINTS DNA photolyase signature 451 469 IPR002081 -
Psa5g0587 582 PRINTS DNA photolyase signature 490 504 IPR002081 -
Psa5g0587 582 MobiDBLite consensus disorder prediction 561 582 - -
Psa5g0587 582 TIGRFAM crypto_DASH: cryptochrome, DASH family 87 530 IPR014133 GO:0003913|GO:0006281
Psa5g0587 582 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 86 221 IPR006050 -
Psa5g0587 582 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 306 539 IPR036134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0587 Psa-Chr5 47058263 47063065 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0587 K25656 - gmx:100783312 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0587 5 47058263 47063065 Psa5g0587 5 47058263 47063065 ECH