Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0558 ATGGACTATTGCATAAGAGAATTAGAAGGAAAACAAGCTCATGATCCTCTATTCATGAAAAAAATGAACAACCATAAATCGCCATCGTCCCCGTCCTCGACCGATCCTCATCGTCGCGTGTTTGTTAACGGACCTGTGATTGTAGGAGCAGGACCATCAGGTTTAGCAGCAGCGGCATGTCTCAAACAAAAAAACATTCCATCCATAATTCTCGAAAGATCCAACTGCATAGCTTCATTATGGCAACTCAAAACCTACGATCGGTTACGTCTCCACCTGCCAAAACAATTCTGCGAACTACCCTTCATGGAATTTCCATCGAATTTCCCAACATACCCTTCAAAGCAACAGTTCATTAAGTACCTGGAGAATTACGCGGAAACGTTCCATATTCGTCCGAAATTCAATGAGACAGTGAAAAATGCCGAATTCGATAGTAAAATCGGTTGCTGGAAGTTGAAGTGTCAAAGTAGTTTTAAAGGCGATGTTACGACGGAGTATGTTTGTCGGTGGTTGATCGTCGCGACCGGAGAGAATGCCGAGGCTGTTGTGCCTGATATTGAAGGTGCAGATGAGTTTGAAGGAGTTATAAGACATACAAGTTTGTATAAAAGTGGTGAAGAGTTTAGAGGGAAGAGAGTTTTGGTTGTTGGGTGTGGAAATTCTGGTATGGAAGTTTGTTTGGATCTTTGTAACCATGATGCTACTCCTTCTCTGGTCGTTAGAGATTCAGTACACGTTCTACCACGAGAGATGCTAGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTAAAGTGGTTTCCATTGAGACTTGTCGATCGTTTCTTGCTGTTAGTGTCATGGCTTTTGCTTGGTGACACTTCTCAACTTGGTTTGGATCGTCCTACTTTGGGTCCCCTTCAACTCAAAAACCTCACGGGAAAAACTCCTGTCCTAGATGTGGGTACCCTTGCCAAGATTAAAGCTGGACACATTAAGGTAAGGCCAAGCATAAAGAAGTTAAAACGTCATACAGTGGAATTTGTAGATGGAAGATCAGAGAATTTTGATGGCATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTCAAGGAAGAGGATATGTTTTCTATGAAAGATGGATTCCCTATGAAGCCATTTCCCAATGGATGGAAAGGTAAAAATGGACTCTATGCAATAGGTTTTACAAAAAGAGGACTATTAGGTGCATCAATGGATGCAAAAAGAATAGCTAATGACATTGAACAATGTTTAAAAGCTGAGGCAAAACATGGATCATAA 1293 0.4138 MDYCIRELEGKQAHDPLFMKKMNNHKSPSSPSSTDPHRRVFVNGPVIVGAGPSGLAAAACLKQKNIPSIILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMEFPSNFPTYPSKQQFIKYLENYAETFHIRPKFNETVKNAEFDSKIGCWKLKCQSSFKGDVTTEYVCRWLIVATGENAEAVVPDIEGADEFEGVIRHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHDATPSLVVRDSVHVLPREMLGKSTFGLSMWLLKWFPLRLVDRFLLLVSWLLLGDTSQLGLDRPTLGPLQLKNLTGKTPVLDVGTLAKIKAGHIKVRPSIKKLKRHTVEFVDGRSENFDGIILATGYKSNVPYWLKEEDMFSMKDGFPMKPFPNGWKGKNGLYAIGFTKRGLLGASMDAKRIANDIEQCLKAEAKHGS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0558 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 45 64 - -
Psa5g0558 430 PRINTS FAD-dependent pyridine nucleotide reductase signature 213 231 - -
Psa5g0558 430 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 34 427 - -
Psa5g0558 430 PRINTS Pyridine nucleotide disulphide reductase class-II signature 44 66 - -
Psa5g0558 430 PRINTS Pyridine nucleotide disulphide reductase class-II signature 209 233 - -
Psa5g0558 430 Gene3D - 45 428 IPR036188 -
Psa5g0558 430 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 34 427 - -
Psa5g0558 430 SUPERFAMILY FAD/NAD(P)-binding domain 46 252 IPR036188 -
Psa5g0558 430 Pfam Flavin-binding monooxygenase-like 47 366 IPR020946 GO:0004499|GO:0050660|GO:0050661
Psa5g0558 430 SUPERFAMILY FAD/NAD(P)-binding domain 210 422 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0558 Psa-Chr5 45063511 45068520 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0558 K11816 - gmx:100799546 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0558 5 45063511 45068520 Psa5g0558 5 45063511 45068520 ECH