Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0540 ATGGGATCGTCATATATCGAGATCGATTCAATCACTATTGATCTTGCCAGTTCTATTGGTAAGAGGGATGCGGGAAAATGTGAACATTTCTCAATACGTGAATATGTCTCGGAAGTTCGAAAAAAAGACTGGAAACTTTGTTGGCCATTTCCAATAGACGAGTCTGAAAAGCAACCATCATTTCCACCATTAGACGTACCAAAACACCGTTGTCCAAACTCTCAAAAAGAAAATGCTTCCGAAGACATTCCTAAAAATAACCAAGCAGACTATAATTACTGTATTACTGGATGCAGATCTGATACCAACTGTAGTAATGAAGCTCTCAAACCTTGTATTCAGAAAGATCCAATGTCTAGCATTATTGTGATAAGAGATATTGATCTTAATACCAAACTGAGTGGTTTCGATGGCTGTCTACCAATTAGTATTGAGAAAGAAAAGAAAGTCGGAGTTGAACTCAGTAAAAGAAGCGACCTTGAGAACAGATTGGAGGATAATCTCAATCATCAAGTAGAAAATGTTCCATCCCCAAAAATTTATCCAGGCTTTGCACAAGAGCACACAACTAAAAGAGGCTTTGCACAAGAAGAGCACACAACTAAAAGAGGTTGTGAAAGTAATGGAGTTTCTAATGTTCAGTTTTCTAACAATCTTACATACACAAATAAGAATTCTACTGAGATTTGTAATGGAGGAACACCTTCTGCAGATAACCAATGCCAGAAAGAATTAGTAGCAACAGCCGTGGAGGCAGATAATAAATGTGATCACACAACTGGACCACCTATTGAATCATTTGCTTGTAATCAAGAAGTGTCTGCAGGAAGTACAGACAATATGGTTGAAGATGATTTTCAGGATAATCATTCAGAAAAGTCCATGGGTGTGTCTCGTAGGAGACCTAGGAAGGTGCGTTTGATGACTGACTTGTTGCGTGAAAATGCTGAATCAAAGACAGAAAAAGCTGCCATACAAGAATCCCCATTCTATGGCATTTCCAATACTTCTGTAGCTTCACAGGCACACTTAATTTTAACAGGAAAGGTGGATTTTCAAGGAGATCCGACTTTAACAAATCAGAGTAGAAAAAGGAAAATTGTCCTAGATGAAGTACGGAGTACGGAAAGTATGCATTTTCAGAGGGATGGATTTGAAGCTCAAAATTTAGAGGGGAATGCAAAAACAACTGTTACGCTTTTCAATAAGAAATCCAATTCCAAAGGTGTACTAGCAGGAACAGGTTCACAGGTTGCTGAGAAAGGCAACTGGAGTAAATCTGAACCTGAAAGAAGCCATATTGTGGGTAAGAAGAAGAACAAAAGGAATCAAGTTGTAGACAATTACTTGATTCCTGAGCCACAAGGACAGAGAAGACAAAATGAGGACACCGTGTATACTGCAGATAAGGCATATGGATCTAAAACTGTTTCTTCTAGATTAACTCCTTCTGTGTTTACAAAGAAAGGGATGGATAGTTTTCCTCTCCACACCCTAAGAATAGAAAATGAGTTCAATCCATCCAAAGAAAAAGGGAAAATGCTGCAAACCGATGAAGAACTTAATTCTTTTTCCTGCCACAGAAATGACATGATTGTCAGAGATTCATTTGCATATTCAGGCATAAAAGTTAGGTCTAATGTGCCTGCAGATGTTCCAATTCCTTTGGTCCAAGGGGTGATGCATGGAAAAGGACTGGAGGAGGGGTTGCATCTTTCTTTAAACAATCCTATGTCAGAACATGGTTACAACCAAAAATGCATCCATCAAATAGAAAATCGCCTTCCCTTCTCATTGCCTTTTCAAGAGAGCACTTCAAGAGTACCTAATCTTAATAGAAAAGAAAGTGAAACCAATGTTTTTGGAGGACCAATCATTCCTTTCAGGCACACAACAAATACTAATTCTGGAAAGAGAAATCACTATGAAGAAATTACTGGTGCAAGAAATACAGGAAAAACTGTTGAAGCTGCGGAACAGCTAGGTATTAATAAAACATACAATGAGCAAGCAGCCGAGGTGTCTGAGCAGGGAACACTAGATGATATACCCATGGAAATTGTGGAACTCATGGCAAAGAATCAGTATGAGAGGTGTCTTCCTGACGTAGAAAATAGATGCTCAATATTTGAAAAATCCTCTAACAGTAGGAATGCACAGATGACATCTGGTACTGCTGTTTACGGCAAAGGGAAGATGAACTTTTTAAAAGAAGGGCAGAAGGAGAAATCAAAGGGAAGGCCTAAGAAAAATAACATGGTCACAAGAGGAGAGAATGTGAAACCTTGCAAAAGAAAGCCAAATCATTACTTTTCTCCATTCAATGGAAGTAATTTGGGAGTGAATAATCCGTATCCACCTCAACCATCCTTTGGATTCGAAGTTCCGCAGTCCCAAAAGAAGCTATCGAATGAATTCCAGTTTTCGCCTATGATTTCTAACCAGCTTGGTAGTGCACGGAGTATCAAGTTTAATGGGAATCTTGAAGAGCGTATACCCTCTAGTGCTACTTTGCAAGCCCTGGGAGGATGTAGGTTACACAAGAATGTATTACAGCAGGATAATGAAGCTTCTCGCATTTGGGCATCCTTGGCCTCAAATCGCACTTCCTTAGGGTATGATGTGTCACAAAAGGTTGCTTCTCAACCTAGTAGTAGCAACATGGACATAACTTCACTCCGATCTGGTGCAGTACATATGCAAAATTCGAGGAGGGATATTGATCTTAACTACACAAATATCAATGCTACAGACCAAGAAAAGCATAGTAGTAGGAATACAGGTGCTGGAGTCTTCAGCAGGATGAATGGAGAATATTCATTTCCTTGCAAACATAATGGAATAGAGCCTCATCAAAATTTGAGGGGATCTTTGGATTTGTATTCTAATGAGACAATACCTGCCATGCATTTACTTAGCCTTATGGATGCCGGAGTGCAGTCACGTACACCCTTCAATGTTGGTGTTAATGCCCAAATGCTCAATAGACCCTCTTATCCTGGTGATTGCAATACCAAGATGGACATAAGTGCTTCTAAGGCCAATGGTACCCTGAAAAGGCAGTCGTCTGATTATTACAACAGAAGCTACTTATCGGATAAACCCCATGTCTGTTTAATTGGCTCTCAAACCTTTGGCACGGCTTCATCAGCTCAGCATGGAAAGAAGTTTACAAAAGATGTGGGATCCAATGATCAAAACGCAACAAAGTTTGGAAAGAAAGAAAAGATGAGGAGTTCCAACGCACCCCTGCAGAGTAGATTTCTTAAGCAGTGTAGCTTGTCTTATAATGAAACAAATACTTCCCAGCAACACAGATTGGAAGTTCACGGTACTCATACCTCTGTGCAATTAAAGATCACACCTGGCATCTCATGTACAGTGAACAGAAATCCAGCTGAGTTCACCATTCCAGAAACAGGGAATGTCTATATGATCAGAGGAGAGGATCTCAAATTTTTTAATAGTATTCCCCAAAACAAACATTTTTCCCCTATTCCATGTGGACACAAGCAGCAGAGGAGTTTGAAAGGAACTAAAATGAAAGAACATTCACAACATTGA 3564 0.3951 MGSSYIEIDSITIDLASSIGKRDAGKCEHFSIREYVSEVRKKDWKLCWPFPIDESEKQPSFPPLDVPKHRCPNSQKENASEDIPKNNQADYNYCITGCRSDTNCSNEALKPCIQKDPMSSIIVIRDIDLNTKLSGFDGCLPISIEKEKKVGVELSKRSDLENRLEDNLNHQVENVPSPKIYPGFAQEHTTKRGFAQEEHTTKRGCESNGVSNVQFSNNLTYTNKNSTEICNGGTPSADNQCQKELVATAVEADNKCDHTTGPPIESFACNQEVSAGSTDNMVEDDFQDNHSEKSMGVSRRRPRKVRLMTDLLRENAESKTEKAAIQESPFYGISNTSVASQAHLILTGKVDFQGDPTLTNQSRKRKIVLDEVRSTESMHFQRDGFEAQNLEGNAKTTVTLFNKKSNSKGVLAGTGSQVAEKGNWSKSEPERSHIVGKKKNKRNQVVDNYLIPEPQGQRRQNEDTVYTADKAYGSKTVSSRLTPSVFTKKGMDSFPLHTLRIENEFNPSKEKGKMLQTDEELNSFSCHRNDMIVRDSFAYSGIKVRSNVPADVPIPLVQGVMHGKGLEEGLHLSLNNPMSEHGYNQKCIHQIENRLPFSLPFQESTSRVPNLNRKESETNVFGGPIIPFRHTTNTNSGKRNHYEEITGARNTGKTVEAAEQLGINKTYNEQAAEVSEQGTLDDIPMEIVELMAKNQYERCLPDVENRCSIFEKSSNSRNAQMTSGTAVYGKGKMNFLKEGQKEKSKGRPKKNNMVTRGENVKPCKRKPNHYFSPFNGSNLGVNNPYPPQPSFGFEVPQSQKKLSNEFQFSPMISNQLGSARSIKFNGNLEERIPSSATLQALGGCRLHKNVLQQDNEASRIWASLASNRTSLGYDVSQKVASQPSSSNMDITSLRSGAVHMQNSRRDIDLNYTNINATDQEKHSSRNTGAGVFSRMNGEYSFPCKHNGIEPHQNLRGSLDLYSNETIPAMHLLSLMDAGVQSRTPFNVGVNAQMLNRPSYPGDCNTKMDISASKANGTLKRQSSDYYNRSYLSDKPHVCLIGSQTFGTASSAQHGKKFTKDVGSNDQNATKFGKKEKMRSSNAPLQSRFLKQCSLSYNETNTSQQHRLEVHGTHTSVQLKITPGISCTVNRNPAEFTIPETGNVYMIRGEDLKFFNSIPQNKHFSPIPCGHKQQRSLKGTKMKEHSQH* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0540 1187 MobiDBLite consensus disorder prediction 738 765 - -
Psa5g0540 1187 PANTHER PROTEIN EMBRYONIC FLOWER 1 3 1181 - -
Psa5g0540 1187 MobiDBLite consensus disorder prediction 1164 1187 - -
Psa5g0540 1187 MobiDBLite consensus disorder prediction 738 767 - -
Psa5g0540 1187 MobiDBLite consensus disorder prediction 424 442 - -
Psa5g0540 1187 PANTHER PROTEIN EMBRYONIC FLOWER 1 3 1181 IPR034583 GO:0009910|GO:0045892|GO:0048367
Psa5g0540 1187 MobiDBLite consensus disorder prediction 415 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0540 Psa-Chr5 43816229 43820959 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0540 - - gmx:100813480 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0540 5 43816229 43820959 Psa5g0540 5 43816229 43820959 ECH