Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0535 ATGGCGATTAGGGTTTTTCTCACCCTTCTTCTTTTTCTCTCGCTAACCAATCTCGTTTCTTCGATTTACGAAGATCAAGTTGGTCTCATGGATTGGCACCAACAGTATATTGGGAAGGTAAAACATGCTGTGTTTCATACTCAAAAGACTGGGCGAAAGCGTGTTTTAGTTTCCACTGAAGAGAATGTTGTGGCTTCACTCGACCTTCGCCATGGAGAGATTTTTTGGAGGCATGTTCTTGGCACCAATGATGTTGTTGATGGAATTGACATTGCCCTTGGAAAATATGTCATTACTCTTTCCTCTGGTGGAAGTATATTGAGAGCATGGAACTTACCTGATGGGCAGATGGTTTGGGAGTCTTCCCTTCAGGGATCAAAGGAATCAAAGTCAATATTAAACATTCCAAAAAATTTGAAAGCTGACAAAGATGATTTGATTCTTGTTTATGGTAAAGGGCATCTCCATGCCATTTCTGGCATAGACGGTGAAATTCTCTGGAGGAAAGATTTTGCCAGTGACAGCATTGAAGTTAACCATATTATTCAGTCTCCTGAAGTGATCTATGTAGCTGGTTTTGTTGGTTCTTCAAAGTTTTACGTGTATGAATTGAATACTAAGAATGGAGAGTTGTTAAAGAATAATCATATAACACTTCCCTTTGGAACTTTTGGGGAATCATTATCAGTCTCAGGTGATAAGTTTGTGGTATTGGATGATCTAAGGTCAAAGATAGTAACAATAAACTTCAATAATGGAGATATTAACTACAACCAGAAGCAAATTTCAGACCTCGTCAAAGATTTGTCTGGACAGGCAGTAATACTACCATCAAGGCTTCCAGGACTGTTCACATTAAAAATCAATTCCAATGTTCTTTTCATTAAAATTACAAATGAAGGTGAGTTGGTGCTGGTGGACAAAATTGATAATGCAGCAGCTTTTAGCAATGCCCTGTCAATTTCAGAGAATCAGCATGTTTTTGCATTTGTTCAATATGAAGACAATAAAATTCACCTATCTGTAAAGGATGTTAATGATTGGAATGGTGATTTGCTAAAGGAAGACTTGGTAGTAGACCATCAAAGAGGAAATATTGAGAAGATATTCATAAACAATTATGTCAGGACAGATAGATCTCATGGGTTCAGAGCATTGATGGTAATGGAGGATCATTCACTTCTATTAGTTCAACAAGGAGAAATTGTCTGGAGTAGAGAGGATGGTCTTGCCTCAGTTGTTGATGTAACAACATCCGAACTACCCGTGGAAAAGGATGGTGTATCTGTGGCAAAAGTAGAACAGAACCTATTCGAATGGCTTAAGGGACATGCGCTGAAACTCAAAGGAACTCTAATGATTGCAAGCCCTGAGGATAAAGTAGCTATTCAAAAGCTTAGGTTGAGGAGTTCTGAGAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAGGGCAGGAAAGGTTTTTGCTTTGCATACCGGGGATGGACATGTAGTTTGGTCTACGGCGCTTCATACTCTGCGTAAATCAGAGGAGTGTGAACATCCAGTTGGGCTTAACATTTATCAATGGCAGGTTCCGCATCATCATGCACTGGACGAGAATCCATCTATTCTTGTCATTGGGCGATGTGGACCAAGTTTGACTGCACCAACTGTTCTTTCTTTCCTTGATGCGTACACAGGGAAGGAACTCAATTCTCTGAGTCTTGCTCATACTGTTGCTCGAGTTATTCCACTGCCTTATACTGATTCAACTGAACAGCGTCTGCATCTTATTATAGACGTAAACAAGCATGCATATTTATACCCAAGAACTCCTGAAGCTATTGAGATTCTGAAACGTGAGTTTTCAAATGTATACTGGTACTCTGTTGAGGTTGATAATGGTGTTATTAGAGGTCATGCATTGAAGAGCAACTGCGTTCATGAAGTAGTGGATGAATACTGCTTTGTATCCAGGGACTTGTGGTCAATTGTATTCCCATCTGAATCAGAAAAAATTATTGCAACAGTGACAAGAAAATCAAATGAGGTTGTTCATACTCAAGCAAAAGTTATGACTGACCACGATGTCCTGTACAAGTATATATCAAAGAATATACTCTTTGTCGCAAATGCAGCACCAAAAGCCAGTGGGGAAATCGGAACAGCAACCCCAGAGGAGGCTTCGTTGGTCATCTATATCATTGATACCGTGACTGGTCGCATATTGCATCGCATGACACATCATGGTTGCCAGGGTCCTGTTCATGCTGTATTTAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTCAGGGCTCATAGACATGAGATGTCAGTTATCGAGGTCTATGACCAGTCTCGGGCGGATAACAAAGATATTTGGAAGTTTGTTCTTGGGAAGCATAATCTTACGTCGCCCATCTCTTCTTATTATCGGCCAGAAATCTCAGCAAAATCACAATCATACTTCTTTACTCACTCTGTGAAAGCCATTGAAGTGACTTCAACTGCTAAGGGTATAACCTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTGGCACTTGATAAACGATTTTTGGATCCCCGGCGGACTCTCAATCCCTCACAAGCTGAGAAAGAAGAAGGAATTATTCCTCTTACTGATTCATTGCCGATCATTTCTCAGTCCTATATTACACATTCCCTAAAAGTAGAAGGTCTGCGAGGTATAATAACAGTGCCCGCCAAATTGGAGTCTACATCCCTCGTCTTTGCCTACGGAGTAGATCTATTTTTTACTCAGATTGCTCCTTCTAGGACTTACGATTCACTAACTGAAGATTTCAGCTATGCTCTACTTCTTCTAACAATTGTTGCCCTTGTAGCAGCATTATTTATTACCTGGGTGTTATCAGAGAGGAAAGATCTACAAGAGAAATGGAGATGA 2946 0.3992 MAIRVFLTLLLFLSLTNLVSSIYEDQVGLMDWHQQYIGKVKHAVFHTQKTGRKRVLVSTEENVVASLDLRHGEIFWRHVLGTNDVVDGIDIALGKYVITLSSGGSILRAWNLPDGQMVWESSLQGSKESKSILNIPKNLKADKDDLILVYGKGHLHAISGIDGEILWRKDFASDSIEVNHIIQSPEVIYVAGFVGSSKFYVYELNTKNGELLKNNHITLPFGTFGESLSVSGDKFVVLDDLRSKIVTINFNNGDINYNQKQISDLVKDLSGQAVILPSRLPGLFTLKINSNVLFIKITNEGELVLVDKIDNAAAFSNALSISENQHVFAFVQYEDNKIHLSVKDVNDWNGDLLKEDLVVDHQRGNIEKIFINNYVRTDRSHGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKDGVSVAKVEQNLFEWLKGHALKLKGTLMIASPEDKVAIQKLRLRSSEKSKMTRDHNGFRKLLIVLTRAGKVFALHTGDGHVVWSTALHTLRKSEECEHPVGLNIYQWQVPHHHALDENPSILVIGRCGPSLTAPTVLSFLDAYTGKELNSLSLAHTVARVIPLPYTDSTEQRLHLIIDVNKHAYLYPRTPEAIEILKREFSNVYWYSVEVDNGVIRGHALKSNCVHEVVDEYCFVSRDLWSIVFPSESEKIIATVTRKSNEVVHTQAKVMTDHDVLYKYISKNILFVANAAPKASGEIGTATPEEASLVIYIIDTVTGRILHRMTHHGCQGPVHAVFSENWVVYHYFNLRAHRHEMSVIEVYDQSRADNKDIWKFVLGKHNLTSPISSYYRPEISAKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLALDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIISQSYITHSLKVEGLRGIITVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAALFITWVLSERKDLQEKWR* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0535 981 SMART ire1_9 140 170 IPR018391 -
Psa5g0535 981 SMART ire1_9 703 750 IPR018391 -
Psa5g0535 981 SMART ire1_9 480 511 IPR018391 -
Psa5g0535 981 Pfam PQQ-like domain 50 130 IPR002372 -
Psa5g0535 981 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 484 873 IPR011047 -
Psa5g0535 981 Pfam ER membrane protein complex subunit 1, C-terminal 763 980 IPR011678 -
Psa5g0535 981 Gene3D - 21 340 IPR015943 GO:0005515
Psa5g0535 981 PANTHER UNCHARACTERIZED 6 981 IPR026895 GO:0072546
Psa5g0535 981 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 31 762 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0535 Psa-Chr5 43053218 43062568 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0535 K23562 - gmx:100790095 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0535 5 43053218 43062568 Psa5g0535 5 43053218 43062568 ECH