Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0515 ATGAGATCAACCCTACCTGAAGTCTCTTTGCGATTTGATGTTGCAAGAACAATGAAAAATAGTGTAGCAAAATTAGTTGATGTGTTTGTGGATTCATTCTTTGAATTCATTGATAAACCATTGCTTCAAAGTAACTTTGCTCCTGTGGAAGAGTTAGGGGAAGCCATACTTTTGAATAGCATCCAAGGACGAATTCCGAATGATTTTCCAGAAGGCGTCTACATTAGAAATGGACCAAATCCACTTTTTGGAGGATTGAAATCAACAAATTCTATCTTTGGTAGGTCAAGTCACATTTGGGTGGAAGGAGAAGGAATGCTTCATGCATTGTATTTTCAAAAATCAAGTCATGGAACCTGGAATGTCACCTATAACAACAAACACGTCGAAACCGAAACTTACAATCTTGAAAAACATAGAAACAAACCATTGTTTCTTCCTGCTATCGAAGGCAACTCGCTCGCGGTTCTGTCTGCTTATCTCTTCAACTATTTGAGATCTGGAAAAGCAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCTGGAAAATTCTACTCAGTTGCTGAAAGTCACATGCCACAAGAGATTGATATTTTTTCCTTGAAAACTTTGAACAATTGGGAACTCAGCGCAGCTTGGAATCGACCTTTTACGAGTCATCCAAAGAAAGCTCCAATCACTGGAGAGCTAGTAACATTAGGTGTGGAACCAATTAAACCTTTTGCCGTGGTTGGAGTTATTTCAGCGGATGGAAATAAGTTTGTTCATAAAGTTGATATCAAACTAAACAGATGCAGTCTTTGCCATGACATAGGTGTTACACAAAGGTACAACGTGATCATGGATTTTCCACTCACCATTGATCTTATCAGACTTCTAAGAGGAGGCCAATTAATAAAGTATGATAAGAAAGAATATGCGAGGATTGGGATAATGCCGCGCTATGGTGATGCGGACTCAATCAAATGGTTTGAGGTTGAACCTAATTGCACCTTTCACATTATCAATTCTTTTGAAGATGGAGATGAGGTTGTTGTGAGGGGATGCAGATCTCTAGATTCTTTAATTCCTGAACCCGACCCGAGTTCGAATGATAATGACTGGTTATCTCGTGGTTACGAATGGCGATTGAACATGAAAACCGGAGAGGTTAAGGAGAAAGATCTGTGTGGTGAGAAAGTAGTTTACATGGATTTTCCTATGATCAATGAAAACTTTGTTGGTATTAAGCATAAATATGCTTACACACAAGTAGTTGATCCCACTGCAAGCTCCACCACTCAAGATGTGCCAAAGTATGGAGGTTTAGCAAAGCTATACTTGGAAGAATCATGTGAAGAGTCTTGTATGTCAATGGTGAAAGATGAAGGTATAAAGATGGAATACCATATGTTTGAGAAGAATACATATTGCAATGGAGCAGCGTTTGTGGCTAGAGATGGAGGAGTTGAAGAAGATGATGGTTGGATCATTACTTTTGTTCACAATGAAGTTACTAACAAATCTCAAGTTCATATAATAGATACAAAGAATTTCTCTGGTGAGACAGTTGCGAAAATTGAAATGCCTTATAGAGTTCCATATGGATTTCATGGAGCTTTCATGCCAATCTCATTCCAAGATCAGTAG 1635 0.3835 MRSTLPEVSLRFDVARTMKNSVAKLVDVFVDSFFEFIDKPLLQSNFAPVEELGEAILLNSIQGRIPNDFPEGVYIRNGPNPLFGGLKSTNSIFGRSSHIWVEGEGMLHALYFQKSSHGTWNVTYNNKHVETETYNLEKHRNKPLFLPAIEGNSLAVLSAYLFNYLRSGKANKYISNTNVFEHSGKFYSVAESHMPQEIDIFSLKTLNNWELSAAWNRPFTSHPKKAPITGELVTLGVEPIKPFAVVGVISADGNKFVHKVDIKLNRCSLCHDIGVTQRYNVIMDFPLTIDLIRLLRGGQLIKYDKKEYARIGIMPRYGDADSIKWFEVEPNCTFHIINSFEDGDEVVVRGCRSLDSLIPEPDPSSNDNDWLSRGYEWRLNMKTGEVKEKDLCGEKVVYMDFPMINENFVGIKHKYAYTQVVDPTASSTTQDVPKYGGLAKLYLEESCEESCMSMVKDEGIKMEYHMFEKNTYCNGAAFVARDGGVEEDDGWIITFVHNEVTNKSQVHIIDTKNFSGETVAKIEMPYRVPYGFHGAFMPISFQDQ* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0515 544 Pfam Retinal pigment epithelial membrane protein 47 538 IPR004294 GO:0016702
Psa5g0515 544 PANTHER BETA-CAROTENE DIOXYGENASE 7 539 IPR004294 GO:0016702
Psa5g0515 544 PANTHER OS06G0162550 PROTEIN 7 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0515 Psa-Chr5 41157465 41159780 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0515 - - gmx:100817738 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0515 5 41157465 41159780 Psa5g0515 5 41157465 41159780 ECH