Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0511 ATGGATCTAGGAATTTTCAGATATCTATGTCAAGCAGAAACAAGGAGATTAGTTTCATTGTTAGGAGTAACAATAGCTTTAATTTTAGTACTTCAATTTTATGAACTTCCAAATAGTGAGTTTTTATCTTCTCTTACTGCCAAAATCAAAAGTTTCACAATGGATACACCTTTGGTTAATTCTACAATGGAGACTCATAATGTAAATGTGAACTTCAATGCTTCAAATTCAAGCTCAATTAGTCCTCAAGAATCTTCATTAGGTAGTGTTGATGGAAAAGATGTTAATTTAACATCACAAGGGAATCAATCTTCCTTGCTTGCACCACAACCTATGGTGCCTTTGCCTAACACATCATTCTTTGATTCAAAAGTGTTTCCAAAGGATGGAATTTTGAGTTCTTTGCTAAGTAGCAATGCGACAATCGTTAAAGACGCGTCTGCGATTTGGAAGAATTCCAAAAGGAGGCCATCTAAAGTAGTTTCGATATCCGAAATGAACTTAATCTTGCAGCATAGCCATGGTTCTTCGCAGGGAGCGAAACCCGCGAGTTCTTCAGCTGTTAATGTGGAGATATTGAATGCAAAATCGGAGATTGAAAATGCGCCTATTGTTATGAATGATTCAAGACTTTACTCACCTTTATACAGGAATGTTTCCATGTTTAGAAGGAGTTATGAACTAATGGAGAAGATGTTGAAAGTTTTCGTCTACCCGGACGGAGACACGCCAATCTTTCATGAACCCTTATTGGAAGGAATATATGCATCTGAAGGATGGTTTATGAAATCAATGGAAGGAAACAAACAGTTTACGACTCGAGATCCTGAGAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTTTATGTGCGTAATTCGCATAAACGTTCAAATTTAATCGAGTACATGAAAAATTATGTCGACGTGATTGCTGGAAAGTACCCTTTCTGGAATAGAACCAATGGAACAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACACGAGGGCGAATGCTTAATTGCATCAGAGCACTTTGCAATGCTGACACTGAAGTAGGATTCAAGATAGGAAAAGATGTATCTCTTCCCGAAACATACGTTAGATCGGTCGAGAATCCTCTCAAAAACATAGGAGGCAACCCTCCTTCTCAGAGGCCGATCCTAGCCTTTTTCGCAGGCGGTTTACACGGTTACGTTCGGCCTATGTTAATAAAACTTTGGGAGAACAAAGAACCCGACATGAAAATCTCCGGCCCGTTACCACACGTAAGAGGTAACAAAAACTACATCGAGCTCATGAAGAGTAGCAGATTCTGCATATGTGCAAGAGGTCACGAAGTTAATAGCCCGCGCGTGGTCGAGGCGATATTCCACGAGTGTGTTCCTGTTATCATATCTGATAACTTTATTCCTCCTTTATTCGAGGTTCTGAATTGGGAGTCATTTGCTGTGTTCATCAAGGAGAAACATATTGCTTATTTGAGGGATGTACTAGTTTCGATCTCGGAAGAAAGATACTTGGAAATGCATAAGAGAGTGAAAATGGTGCAAGAGCATTTTCTTTGGCATCATGAGCCTGTTAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTATAATAGAGTTTTCTATACAAGTTAG 1680 0.3905 MDLGIFRYLCQAETRRLVSLLGVTIALILVLQFYELPNSEFLSSLTAKIKSFTMDTPLVNSTMETHNVNVNFNASNSSSISPQESSLGSVDGKDVNLTSQGNQSSLLAPQPMVPLPNTSFFDSKVFPKDGILSSLLSSNATIVKDASAIWKNSKRRPSKVVSISEMNLILQHSHGSSQGAKPASSSAVNVEILNAKSEIENAPIVMNDSRLYSPLYRNVSMFRRSYELMEKMLKVFVYPDGDTPIFHEPLLEGIYASEGWFMKSMEGNKQFTTRDPEKAHLFYIPFSSRLLQLTLYVRNSHKRSNLIEYMKNYVDVIAGKYPFWNRTNGTDHFVVACHDWAPAETRGRMLNCIRALCNADTEVGFKIGKDVSLPETYVRSVENPLKNIGGNPPSQRPILAFFAGGLHGYVRPMLIKLWENKEPDMKISGPLPHVRGNKNYIELMKSSRFCICARGHEVNSPRVVEAIFHECVPVIISDNFIPPLFEVLNWESFAVFIKEKHIAYLRDVLVSISEERYLEMHKRVKMVQEHFLWHHEPVKYDLFHMLLHSIWYNRVFYTS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0511 559 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 119 557 IPR004263 GO:0006486|GO:0016757
Psa5g0511 559 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 119 557 - -
Psa5g0511 559 Pfam Exostosin family 230 509 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0511 Psa-Chr5 40807152 40809974 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0511 - - lja:Lj1g3v2067550.1 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0511 5 40807152 40809974 Psa5g0511 5 40807152 40809974 ECH