Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0499 ATGGCTCAACTCTTCAGAGACCTATCGTTAGGCCATTCCAAGAGAGAAACAACACCGTCACCGCCGTTCAAGATAATGCCTCCGAAGAAACCACCTACCGTCCCCGCCGACGATCTTCCCTCACCGCTCGGTCAACTTTCCACCAACCTCTCCGATTCGGAACTCGCCCTAACTGCCTACGAGATCTTCGTTGCCGCGTGCCGGACTTCGTCAGGTAAGCCGCTGAGTTCGTCTATTGCTAACTCGGCTTCGAATAGTCATTCGGTTTCGCCGAGTCAGAACTCGGTAGGTATTCAGCGATCGCTAACTTCTACGGCGGCTAGTAAGGTTAAGAAGGCTTTTGGATTGAAATCTCCCGGTTCGGGTTCTAAGAAGAGTCCTGGTTCTGGTTCGGGTTCCGGTTCTGGTTTGGGGAAGGTGAAACGGCCGTTGACGGTTGGGGAGCTTATGAGGAATCAGATGAGGGTTTCGGAAGCTATGGATTCGCGTGTCAGACGTGCGTTGCTCAGGATTTCTGCTGGACAGGTTGGAAGAAGGATTGAGTCTGTGGTGGTTCCACTTGAGCTAATGCAGCAGCTCAAGGCTTCGGACTTTACGGATCAACAGGAGTATGATGAATGGCAGAAGAGGACTCTCAAGGTTCTGGAGGCTGGTTTAATTTTGCATCCTTATATACCTTTGGATAAATCCAACTCTGCTGGGCAGAGGCTACGGCAGATTATTCATGGTGCTTTGGATAGGCCCATTGAAACTGGGAAGAACAATGAGCCCATGCAGGTTCTTCGTAGTGCTGTTATGACTCTTGCAAATAGGTCTTATGATGGATCTCTCACTGATTCATGCCACTGGGCAGATGGGATTCCATTGAATCTCAGGCTTTATGAAATGCTTCTACAGTCCTGCTTTGATGTTAATGATGAATCATCAATTATTGATGATTTTGATGAGCTAATGGAACAAATTAAGAAGACCTGGGGAATACTTGGATTAAACCAGACGTATCATAATCTTTGTTTTACTTGGGTTTTATTTCATCGATTCGTTGCTACTGGCCAGATGGATTTGGAGCTTCTGTCTGATGCTGATGGCCATCTAGCTGAAGTTGCAAAAGATGCAAAGACAACAAAAGATTCCGAGTATTCCAAAATTTTGAGTTCGACATTGACTTCAATATTGGGATGGGCAGAGAAAAGGCTTCTTGCATACCATGAAACTTTTGATAGTGGTAATGTTGAAACTATGGAGGGCATAGTCTCTTTAGGGGTAGCAGCGGCTAAGATATTGCTTGAAGACATATCTAATGAGTATCGCAGGAGGAGAAAAACTGAAGTCAACGTGGCCCGGGAAAGAATTGAAACTTATATAAGGTCATCTCTACGTACTGCCTTTGCCCAGATAATGGAGAAAGCAGACTCAAGCAGGAGGGCATCAAGAAACCAGCCAAATGCCCTCCCTCTCCTTGCCATTCTTGCAAAGGATGTAGGCAGCCTGGCAATGAATGAAAAGCTAGTGTTCAGCCCGATACTCAAGAGATGGCATCCTTTGGCAGCAGGTCTTGCTGTGGCTACCCTTCATGCATGCTATGGAAACGAAATGAAGCAATTCATTGCAGGTATCACAGAATTGACCCCAGATGCTGTTCAAGTGTTAAGAGCAGCAGACCAGTTGGAGAAAGACCTTGTGCAGATAGCTGTTGAGGATTCAGTAGACAGTGATGATGGTGGCAAAGCAGTAATTCGTGAGATGCCTCCTTACGAGGCTGAAGGTGCAATTGCCAATCTTGTAAAAATATGGATAAAGACTAGAATAGACAGACTAAAAGACTGGGTTGATAGAAATCTTCAACAAGAGCTTTGGAGTCCACAAGCAAATCAGGAAGGATACGCCCCGTCTTCTGTTGAAGTTCTGCGAATCATAAATGAGACTCTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTGCTTCCTGATGTGATGCATGGCCTTGATAGATGCCTTCAATATTATGTTGCTAAGTCAAAATCTGGCTGTGGATCACGAAATACATTTATTCCAACAATGCCGGCACTGACGAGATGCACTATTGGCTCAAAATTTCAAGGCTTTGGGAAGAAAAAAGAGAAATCTCCAAATCCTCAGAAGAGAAACTCTCAGGTTGCAACAAATGGGGATAGCTCTTTTGGGATACCACAGCTGTGTGTTCGCATGAATACTTTGCAGTGGATCCTGGGTGAATTTGATGTTCTGGAAAAACGAATAATTACTCTTCTACGGAATTCAGAATCTGCTCGAGAAGAAGATTTTTCAAATGGATTAGCAAGTAAATTTGAACTATCTTCAGCCGCATGTCTTGAAGGAATTCAGCAACTCTGTGAGGCTGCAGCATATAGAATTGTCTTCCATGATCTAAGCCATGTTTTGTGGGATGGTCTGTATGTTGGGGATCCATCATCTTCCAGGATTGATCCATTTCTTCAGGAACTTGAGCGGAACTTAATGTTCATTTCAGACAATGTTAATGAAAAAATTCGCACCCGTATTATTACTGAAATAATGAGAGCCTCCTTTGATGGATTCTTGTTTGTATTGCTCGCTGGAGGTCCCTCTCGTGCTTTTTCCAAGAAGGACTCACAGATCATAGAGGATGATTTCAAGTTTCTAAAGGAGTTGTTTTGGGCGAATGGGGACGGCCTGCCTTCTGAAATAATAGACAAGTTTGCAACTACCCTGAGGTCTATCCTTCCCCTTTTCAGGACAGACACAGAGAGCCTCATTGAGCAGTTTAGACGGTTAACCCTTGAGACATATAAATCTTCAGCCAGGTCTAGAATTCCATTACCTCCAACTTCTGGACAGTGGAGTCCAACTGAACCAAATACATTATTACGTGTTTTATGCCATAGAAACGATGAATCAGCTTCCAAGTTTCTTAAAAAGACATATGATCTGCCTAAGAAACTTTGA 2973 0.4416 MAQLFRDLSLGHSKRETTPSPPFKIMPPKKPPTVPADDLPSPLGQLSTNLSDSELALTAYEIFVAACRTSSGKPLSSSIANSASNSHSVSPSQNSVGIQRSLTSTAASKVKKAFGLKSPGSGSKKSPGSGSGSGSGLGKVKRPLTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELMQQLKASDFTDQQEYDEWQKRTLKVLEAGLILHPYIPLDKSNSAGQRLRQIIHGALDRPIETGKNNEPMQVLRSAVMTLANRSYDGSLTDSCHWADGIPLNLRLYEMLLQSCFDVNDESSIIDDFDELMEQIKKTWGILGLNQTYHNLCFTWVLFHRFVATGQMDLELLSDADGHLAEVAKDAKTTKDSEYSKILSSTLTSILGWAEKRLLAYHETFDSGNVETMEGIVSLGVAAAKILLEDISNEYRRRRKTEVNVARERIETYIRSSLRTAFAQIMEKADSSRRASRNQPNALPLLAILAKDVGSLAMNEKLVFSPILKRWHPLAAGLAVATLHACYGNEMKQFIAGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDSDDGGKAVIREMPPYEAEGAIANLVKIWIKTRIDRLKDWVDRNLQQELWSPQANQEGYAPSSVEVLRIINETLDAFFQLPIPMHPALLPDVMHGLDRCLQYYVAKSKSGCGSRNTFIPTMPALTRCTIGSKFQGFGKKKEKSPNPQKRNSQVATNGDSSFGIPQLCVRMNTLQWILGEFDVLEKRIITLLRNSESAREEDFSNGLASKFELSSAACLEGIQQLCEAAAYRIVFHDLSHVLWDGLYVGDPSSSRIDPFLQELERNLMFISDNVNEKIRTRIITEIMRASFDGFLFVLLAGGPSRAFSKKDSQIIEDDFKFLKELFWANGDGLPSEIIDKFATTLRSILPLFRTDTESLIEQFRRLTLETYKSSARSRIPLPPTSGQWSPTEPNTLLRVLCHRNDESASKFLKKTYDLPKKL* 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0499 990 MobiDBLite consensus disorder prediction 1 40 - -
Psa5g0499 990 MobiDBLite consensus disorder prediction 704 724 - -
Psa5g0499 990 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 547 690 IPR014770 -
Psa5g0499 990 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 821 931 IPR014772 -
Psa5g0499 990 Coils Coil 749 769 - -
Psa5g0499 990 PANTHER PROTEIN UNC-13 HOMOLOG 2 990 IPR008528 -
Psa5g0499 990 Coils Coil 828 848 - -
Psa5g0499 990 MobiDBLite consensus disorder prediction 113 144 - -
Psa5g0499 990 MobiDBLite consensus disorder prediction 21 38 - -
Psa5g0499 990 PANTHER ELONGATION FACTOR TS (DUF810) 2 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0499 Psa-Chr5 39547186 39552167 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0499 - - gmx:100814675 1677.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0499 5 39547186 39552167 Psa5g0499 5 39547186 39552167 ECH