Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0483 ATGGGACAACAATCCAACGATCTCTGGGAAGGTAAACTCACCGTCGAGCTAACCACCACCGCACCGGAACAAGCATGGCCAGCTTTAGAGGATTTCTGCAACCTACACAAATGGATCCCAATAACTACATGTTATTACCTTGAAGGTGTTGAAGGACAGCCTGGTTTAATTCGATACTGTTCTTCAGAGGTTGTTGAAGATGCTGCTGCGGTTGAGTCTGAGACGACGGTGAAGTGGGCGAAAGAGAAGCTGTTGGCTATGGATCCTGTACGACGGTGTTTGTCGTATGAAATTGGTGAAAACAACATGGGGTTTAAGTCTTATGTGGCGACGATGAAGGTAATTCCGGTGGACGGCGAAGGTGAAAGTGTTGGGTGTTTGATTGAATGGGGGTTTGTTTGTGATCCGGTGGAAGGTTGGAGTATTCAAGATTTTAGCTCTTATATTGAGTACTGTCTTCAGTTCATGGCTAACAAGATTGAGGTTGAAGCCTCTCTAACTGGTTATGATGTAATAGATGTGTATGTGGAGCATAGTGTGGGAATTCCTGAGATTGTTGATGATGGTGAATTAGATGCTAACATTGAGGATGATGGTGAAGATGATGTACAATGCACTGGGTTTAAAAGTGTAAATGGTATTGCTGAAGATGGTACTAATGATCCTAATGGTGTTGCTGAAGATGTTACTAATGATCCTAGTATTGTTGTTGAATATGGTACTAATGATCCTAATGGTGTTGCTGAAGATGTTACTAATGATCCTAGTGTTGTTTCTGAAGATAAATGGCGTGATCTTGAAGTTCTAACTGATGAAGCTCAAGAACACGATGAAGATTCTGATGGAATATACAGATTCCGACAAGTCTCCGACCAAGCTCCGACTAAGTGTTTTTTTGAACTTTTCTTTGGAGTTTATGGTTTTTTTAGGGCTTATGAATTCTGGAGTTTATGGATGTAG 960 0.4146 MGQQSNDLWEGKLTVELTTTAPEQAWPALEDFCNLHKWIPITTCYYLEGVEGQPGLIRYCSSEVVEDAAAVESETTVKWAKEKLLAMDPVRRCLSYEIGENNMGFKSYVATMKVIPVDGEGESVGCLIEWGFVCDPVEGWSIQDFSSYIEYCLQFMANKIEVEASLTGYDVIDVYVEHSVGIPEIVDDGELDANIEDDGEDDVQCTGFKSVNGIAEDGTNDPNGVAEDVTNDPSIVVEYGTNDPNGVAEDVTNDPSVVSEDKWRDLEVLTDEAQEHDEDSDGIYRFRQVSDQAPTKCFFELFFGVYGFFRAYEFWSLWM* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0483 319 Pfam Polyketide cyclase / dehydrase and lipid transport 18 145 IPR019587 -
Psa5g0483 319 Gene3D - 2 171 IPR023393 -
Psa5g0483 319 SUPERFAMILY Bet v1-like 19 160 - -
Psa5g0483 319 PANTHER - 8 164 - -
Psa5g0483 319 CDD PYR_PYL_RCAR_like 9 161 - -
Psa5g0483 319 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 8 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0483 Psa-Chr5 38413793 38419635 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0483 - - gmx:100798368 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0483 5 38413793 38419635 Psa5g0483 5 38413793 38419635 ECH