Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0481 ATGAAACTGGACACAGAAACAGAGTGGTGCCTTCCAAATAATGTCGTAGACATTACTTGCATGGATAATCAATCAACCGTGGTGGCAGAGAAAGTGAACAAAACGGTGCGTTTAATAGGTTTCCTGATACAAAACGGTGTCTCTAAGAGCAACAGAGTTATGCATGACATGCATGAGATGATGAAGAGAGGAAAAAACATAGGAAAAGCACTCAACACTGTGATGGTGAAGCACCACGAAGCACTCTCGTGCCGTCCACGTGATGCTGACATGTACTTCGTGTCACCATTGGAGTATCAGTTCAGCTGTAGCGGCAGTCCACCTCGTCTCTCTCGCGGTGCCAGCAGCAGGAGGAAGCTTTTATCTCCGGCAAAGGAGGATAGTCGCCGGGGTATGAAGGTGTGTGGTGAAACCGGCATTGAAAGGAGGCGCGTGAAGGTGACGACGGTGTCGAGGGAGACGGAAAAGGAGAAAGAGTTTCATGTTGATCAAGCGGCGGAGGAGTTTATTGATAGGTTTTACAGAGAACTGAGGTTGCAGAAATGGTTGGACCATCATCACCATCATCACTATTAA 576 0.4757 MKLDTETEWCLPNNVVDITCMDNQSTVVAEKVNKTVRLIGFLIQNGVSKSNRVMHDMHEMMKRGKNIGKALNTVMVKHHEALSCRPRDADMYFVSPLEYQFSCSGSPPRLSRGASSRRKLLSPAKEDSRRGMKVCGETGIERRRVKVTTVSRETEKEKEFHVDQAAEEFIDRFYRELRLQKWLDHHHHHHY* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0481 191 PANTHER DUF761 DOMAIN PROTEIN 21 187 - -
Psa5g0481 191 Pfam Cotton fibre expressed protein 162 181 IPR008480 -
Psa5g0481 191 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 21 187 - -
Psa5g0481 191 MobiDBLite consensus disorder prediction 108 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0481 Psa-Chr5 38355256 38356396 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0481 - - mtr:MTR_3g109920 283.878