Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0478 ATGGATCGTTTGCGTCCTCGTAACAGATCACTTTTTTCCGGATTCACCAATTCCGAGATTGAGAAAATGGAGAAAGTGCTAAGGGAAACGAAAGGACAATCATTGACTCAGGATTTTTACCAGAAATTGACTAAAAGTTTCAATTATTCATCTGGTCGTGCTGGGAAACCTCTTGTCAAATGGACTGAGATAGAAAGTTGGTTTCAGACTAGGCTCCAGGAATCGCCGCAAGTACCTGAAAATGAATTGATTTTTCCTCCAGGACTTCAATGTAAAGAAGGAGAAATTGTCCGAGACCCATCCGAGTTGGAATTTGAAGCTAGGTCTTCAAAAGATGAGGCATGGTATGATGTTGAGACGTTTCTTGCTCACAGATTTCTTAGCTCGGGGGAAGCTGAAGTCAAAGTCAGATTTGTTGGATTTGGAGCCGAGGAAGATGAGTGGGTCAACATAAAAAGTTCTGTCCGAGAACGGTCAGTTCCGTTTGAAAATTCAGAGTGTTCCGGCCTGAAAACCGGAGACCCTGTCCTATGCTTCCAGGAGAGGAGAGATCAAGCTATCTACTACGACGCACACATTTTAGAGATCCAGAGGAGAATGCATGATATCCGAGGTTGCAGGTGTCATATCTTAATTCGGTATGATCACGACAACACTGAGGAAAGAGTTCGCTTGAGAAGACTTTGCCATAGACCAAGATCTTAG 705 0.434 MDRLRPRNRSLFSGFTNSEIEKMEKVLRETKGQSLTQDFYQKLTKSFNYSSGRAGKPLVKWTEIESWFQTRLQESPQVPENELIFPPGLQCKEGEIVRDPSELEFEARSSKDEAWYDVETFLAHRFLSSGEAEVKVRFVGFGAEEDEWVNIKSSVRERSVPFENSECSGLKTGDPVLCFQERRDQAIYYDAHILEIQRRMHDIRGCRCHILIRYDHDNTEERVRLRRLCHRPRS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0478 234 Pfam SAWADEE domain 102 229 IPR032001 GO:0003682
Psa5g0478 234 Gene3D - 162 234 - -
Psa5g0478 234 Gene3D - 100 161 - -
Psa5g0478 234 PANTHER OS09G0346900 PROTEIN 9 233 - -
Psa5g0478 234 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 233 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0478 Psa-Chr5 38233199 38235673 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0478 - - gmx:100801021 375.941