Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0466 ATGACTCAGAAAAACAGCATGTACATCGACACTCCAGAAGCTTTTATCGATGGTGGCAAAAACTTTGACGATGATGGACGAGACAAAAGAACTGGTACATGGGTGACTGCAAGTGCACACATCATAACAGCAGTGATAGGTTCAGGAGTTTTATCACTTGCATGGGCAATAGCTCAAATGGGTTGGGTGGCTGGTCCAGCAGTTCTACTAGCTTTTTCTTTAATCACTTATTTCACTTCCACTCTTCTTGCTGATTCCTATCGTTCACCTGATCCTGTTCATGGCAAACGAAACTACACTTACTCAGAAGTTGTAAGATCTGTCTTAGGAGGAAGAAAATTCCAGCTATGTGGATTAGCTCAATATATAAATCTCATCGGTGTAACTATCGGTTACACGATAACTGCTTCGATTAGTATGGTGGCTGTGAAGAGGTCGAATTGCTATCATAAACATGGACATGAAGCAAAGTGTTATATATCAAATAATCCTTTCATGATTATATTTGCTTGCATTCAAGTTGTGCTAAGTCAAATACCGAATTTCCATAAGCTTTCATGGCTCTCAATAGTTGCAGCTGTTATGTCTTTTGCTTACTCCGCAATTGGGTTAGGTCTCTCTATAGCTAAAGTAGTAGGTGGGGGACCTGCTGTAAGGACATCGTTAACAGGGGTGCAAGTTGGGGTGGATGTTACAGGAACTGAGAAAGTTTGGAGGATGTTTCAAGCTATTGGTGATATTGCATTTGCTTATGCTTATTCTAATGTGCTCATTGAGATTCAGGATACCTTGAAATCAAGCCCTCCAGAGAACCAAATCATGAAAAGAGCAAGTATGATTGGCATCTTGACTACAACAATGTTTTATATGTTGTGTGGTTGTTTAGGATATGCAGCATTTGGAAACGATGCACCGGGAAATTTCCTCACTGGGTTCGGCTTTTACGAGCCGTTTTGGCTAATAGATTTTGCCAACGTCTGCATAGCAGTACACTTGATTGGAGCTTATCAGGTCTTCTGTCAACCAATATTTGGATTCGTAGAAAGTAAGAGTAAGGAAAAATGGTCGGATAGCAAATTTGTAAATGGAGAGCATGCTATAAATGTTCCTCTATGTGGAACCTTATATGTGAACTTCTTCAGGGTAGTGTGGAGAACATCATATGTTGCTGTCACTTCTCTCATAGCTATGATGTTTCCATTCTTCAATGACTTCCTAGGCTTGATTGGTTCACTTTCCTTTTGGCCATTAACGGTTTATTTCCCCATAGAGATGTACATTAAGCAGTCCAAGATGCAAAGATTTTCCTTCACATGGACATGGCTCAAGATATTGAGCTGGGCGTGCCTCATCGTTTCTATCATCTCGGCTGCTGGTTCCATCCAAGGCCTTGCTCATGATCTCAAAAAATACCAGCCATTCAAAGCTCAGCAATAA 1437 0.4071 MTQKNSMYIDTPEAFIDGGKNFDDDGRDKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLLAFSLITYFTSTLLADSYRSPDPVHGKRNYTYSEVVRSVLGGRKFQLCGLAQYINLIGVTIGYTITASISMVAVKRSNCYHKHGHEAKCYISNNPFMIIFACIQVVLSQIPNFHKLSWLSIVAAVMSFAYSAIGLGLSIAKVVGGGPAVRTSLTGVQVGVDVTGTEKVWRMFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENQIMKRASMIGILTTTMFYMLCGCLGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFGFVESKSKEKWSDSKFVNGEHAINVPLCGTLYVNFFRVVWRTSYVAVTSLIAMMFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMQRFSFTWTWLKILSWACLIVSIISAAGSIQGLAHDLKKYQPFKAQQ* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0466 478 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 9 471 - -
Psa5g0466 478 Pfam Transmembrane amino acid transporter protein 30 463 IPR013057 -
Psa5g0466 478 PANTHER OS05G0424000 PROTEIN-RELATED 9 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0466 Psa-Chr5 37320953 37323390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0466 1 476 Organic Solute Cotransporters AT5G49630 76.667 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0466 K24917 - gmx:100777963 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0466 5 37320953 37323390 Psa5g0466 5 37320953 37323390 ECH