Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0446 ATGGAGCTAATTGTTCGGCGAACTTCATGTTTGAATTGCAAGCTTTGGTTCGCTGTTGTTGTTGAGATCATTTTGATATTGGCATTGGTGGAAGCTCACACTGCAAAGCCCCACGAAGACCAACTTCAATGGGGAGGTTTGGAAAGGAATACAAAGAACATTGCCTCACACTCTTGCATACATGACCAGATTCTTGAACAGAGGAAGCGACCTGGTCGCAAGGTTTATTCAGTTACCCCACAGGTTTACGAGCCTGGTAGCTTGAAGCCCCTTCAGCATAAAGGTAGAGCAATACTTGCAGTGTCAACATCATTAGGGCCTCAAAAGGATGCAAAGGAACCTATTAGGATATATTTAAATTATGAAGCTGTTGGCCACTCCCCTGACAGAGATTGTCGAAAAGTTGGCGCTGTTGTCAAACTTGGAGAGCCTCCCACAACTTCTCTCCCTGATTCCCCTTCTTGCAATGCTCATGGTAACCCTCCAATTGTTGGTGATTGTTGGTATAACTGCACTTCTGATGATATCTCAGGAGAAGACAAAAAACACCGCCTTCGCAATGCATTAGGTCAGACAGCTGACTGGTTTAGGAGAGCTTTAGCTGTTGAGCCTGTCAAGGGTAACTTGCGGTTAAGTGGATATTCTGCATGTGGACAAGATGGAGGCGTGCAGCTTCCTCGTGGATATATCGAGGAAGGTGTCCCCGATGCTGACTTAGTTCTTTTGGTCACTACAAGACCTACAACTGGAAATACACTTGCTTGGGCTGTGGCATGTGAACGGGATCAATGGGGCCGTGCTATAGCTGGACACGTGAATGTTGCTCCTCGCCATTTGACTGCTGAGGCTGAGACTTTGCTTTCAGCTACTCTAATACATGAGGTTATGCATGTTCTTGGTTTTGACCCACATGCCTTTGCTCATTTTAGAGATGAAAGGAAAAGGCGGCGTGATCAGGTTACCGAACAAGTAATGGATGAAAAGCTTGGGCGGATGGTCAATCGAGTGGTGCTTCCTCGTGTTGTCATGCATTCACGATATCATTATGCGGCATTCTCTGGAAATTTTACTGGTTTAGAACTGGAAGATGGGGGAGGACGCGGCACATCAGGGTCTCACTGGGAGAAAAGGCTTCTGATGAATGAGATTATGACTGGTTCCGTGGATACAAGATCTGTAGTTTCAAAAATGACTTTAGCTCTCTTAGAAGATAGTGGATGGTACAAAGCCAATTATAGCATGGCAGACCGTCTTGATTGGGGTCGCAACCAAGGTACTGAATTTATTACCTCCCCTTGCAATCTTTGGAAGGGAGCTTATCATTGCAACACAACGCAATATTCTGGCTGTACATATAACAGAGAGGCAGAGGGATACTGCCCAATCCTAACATATAGCGGAGACCTCCCTCAGTGGGCGCAATATTTTCCACAAGCTAATAAAGGTGGACAATCCTCATTGGCTGATTATTGTACCTATTTTGTTGCGTACTCTGATGGGTCATGTACAGATACTAATAGTGCACGATCACCAGATAGAATGCTTGGTGAAGTCAGAGGAAGTAACTCCAGGTGTATGGCCTCATCATTAGTGCGTACAGGATTTGTACGAGGTTCTATGACTCAGGGAAATGGTTGTTATCAGCACAGATGTATAAACAGTTCTTTAGAGATTGCTGTGGATGGCATCTGGAAAGTGTGTCCTCGTGCTGGTGGACCCGTTTTGTTCCCTGGCTTTAATGGTGAGTTAATCTGCCCTGCATATCCAGAGCTCTGTAACTCTGACCCAGTATCTCTGTCTGGTCAATGTCTCAATTCATGTAATTTCAATGGAGACTGTGTTGATGGAAGATGCCACTGCTTTCTTGGATTTCACGGGCATGATTGCAGTAGACGTTCCTGCCCCAGTAACTGCAATGGTAACGGCATGTGCCTTTCCAATGGGTTTTGTGAATGCAAAACTGGCTACACCGGCATTGACTGTTCCACTGCTGTGTGTGATGAGCAATGCAGCCTTCATGGTGGAGTTTGTGATAATGGAGTTTGTGAATTCCGTTGTTCTGACTATGCCGGATACACATGCCAGAACAGCTCCATGCTCCTATCTAGTCTCTCTGTTTGCAAAAATGTTCTGGGAAGTGATGTATCTGGTCAGCATTGTGCACCCAGCGAGCCTAGCATATTACAGCAGTTGGAAGAAGTGGTTGTCATGCCGAACTACCACCGATTATTCCCTGGAGGTGCCAGGAAATTATTTAATATATTTAGCAGCACCTACTGTGATGAGGCTGCTAAACGGCTTGCCTGCTGGATCTCAATCCAGAAGTGTGACAAGGATGGAGATAACAGGCTTCGGGTTTGCCATTCCGCATGCCAATCTTATAATATAGCATGTGGAGCCTCACTTGACTGCTCTGACCAAACCCTCTTCAGCAGTGAGGGTGAGGGGGAGGGTCAGTGCACCGGTTTTGGGGAGATGAAAGTGTCGTGGTTTAATCGCATGCGAAACGGTTTTTCTTTGAGAAATAGTTCCTTGAAAGGAATGTCTGTAAGATATAGGAAACTTTAA 2568 0.4568 MELIVRRTSCLNCKLWFAVVVEIILILALVEAHTAKPHEDQLQWGGLERNTKNIASHSCIHDQILEQRKRPGRKVYSVTPQVYEPGSLKPLQHKGRAILAVSTSLGPQKDAKEPIRIYLNYEAVGHSPDRDCRKVGAVVKLGEPPTTSLPDSPSCNAHGNPPIVGDCWYNCTSDDISGEDKKHRLRNALGQTADWFRRALAVEPVKGNLRLSGYSACGQDGGVQLPRGYIEEGVPDADLVLLVTTRPTTGNTLAWAVACERDQWGRAIAGHVNVAPRHLTAEAETLLSATLIHEVMHVLGFDPHAFAHFRDERKRRRDQVTEQVMDEKLGRMVNRVVLPRVVMHSRYHYAAFSGNFTGLELEDGGGRGTSGSHWEKRLLMNEIMTGSVDTRSVVSKMTLALLEDSGWYKANYSMADRLDWGRNQGTEFITSPCNLWKGAYHCNTTQYSGCTYNREAEGYCPILTYSGDLPQWAQYFPQANKGGQSSLADYCTYFVAYSDGSCTDTNSARSPDRMLGEVRGSNSRCMASSLVRTGFVRGSMTQGNGCYQHRCINSSLEIAVDGIWKVCPRAGGPVLFPGFNGELICPAYPELCNSDPVSLSGQCLNSCNFNGDCVDGRCHCFLGFHGHDCSRRSCPSNCNGNGMCLSNGFCECKTGYTGIDCSTAVCDEQCSLHGGVCDNGVCEFRCSDYAGYTCQNSSMLLSSLSVCKNVLGSDVSGQHCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFSSTYCDEAAKRLACWISIQKCDKDGDNRLRVCHSACQSYNIACGASLDCSDQTLFSSEGEGEGQCTGFGEMKVSWFNRMRNGFSLRNSSLKGMSVRYRKL* 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0446 855 Gene3D Leishmanolysin domain 3 437 495 - -
Psa5g0446 855 ProSitePatterns EGF-like domain signature 1. 650 661 IPR000742 -
Psa5g0446 855 Gene3D Leishmanolysin domain 4 497 592 - -
Psa5g0446 855 Pfam Leishmanolysin 168 594 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa5g0446 855 ProSitePatterns EGF-like domain signature 2. 650 661 IPR000742 -
Psa5g0446 855 ProSiteProfiles EGF-like domain profile. 630 662 IPR000742 -
Psa5g0446 855 Gene3D Laminin 633 664 - -
Psa5g0446 855 Gene3D Laminin 602 631 - -
Psa5g0446 855 Pfam EGF-like domain 634 661 IPR013111 -
Psa5g0446 855 Gene3D - 108 298 - -
Psa5g0446 855 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 110 597 - -
Psa5g0446 855 PANTHER LEISHMANOLYSIN-LIKE PEPTIDASE 2 827 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa5g0446 855 Gene3D Leishmanolysin , domain 2 308 433 - -
Psa5g0446 855 PANTHER METALLOENDOPEPTIDASE/ZINC ION-BINDING PROTEIN 2 827 - -
Psa5g0446 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 243 272 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
Psa5g0446 855 PRINTS Leishmanolysin (M8) metalloprotease family signature 396 425 IPR001577 GO:0004222|GO:0006508|GO:0007155|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0446 Psa-Chr5 36316606 36325715 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0446 K01404 - gmx:100775874 1622.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0446 5 36316606 36325715 Psa5g0446 5 36316606 36325715 ECH