Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0426 ATGAAAGCCATAGGTAAAATATCAGTTCCAACTGCAATAACTGGTTTACTCTTATATTCAAGAGCTATGATCTCTATGCTTTTCCTCGGATATCTCGGCGAGACTCAGCTTGCAGGAGGCTCTCTCTCTATAGGTTTCGCAAACATCACCGGCTACTCTATCATCTCCGGCTTAGCCATGGGAATGGAACCTATTTGTGGACAAGCTTATGGAGCTAAACAATGGAAGATACTCGGTTTAACTCTTCAAAAAACAACACTTTTGCTTCTCTCTACTTCAATCCCCATTTCATATCTATGGCTTAACATGAAAAATATTCTCTTGTTATGTGGTCAAGACCAAGAGATTTCATCCACAGCACAAACTTTCATCCTGTTTTCTTTACCGGATCTTTTCTTTCTGTCCTTTCTTCATCCTCTTCGTATTTACCTAAGAACGCAAAACATAACGTTACCATTAACGTATTGTTCCGCTGTATCTGTGATTCTTCACGTTCCTTTGAATTTTGTTCTCGTGGTTTATTTCAAAATGGGTGTTGCGGGGGTGGCGATAGCAATGATTTGGTTTAATCTTAACCTTTTGATTTTTCTTTCGTCTTTTGTTTTTTTCTCGGGTGTATATAAAGACTCATGGGTGTTTCCTAGTATGGAATGTCTCCAAGGTTGGTCTTCGTTACTTAAACTTTCGATTCCGTCGTGTGTTTCTGTCTGTTTAGAATGGTGGTGGTATGAACTCATGATAATTTTGTGTGGACTTTTGGTCAACCCAAAGTCAACGATTTCTTCCATGGGTATTCTTATTCAAACAACGTCGTTGGTTTATGTTTTTCCTTCTTCTCTTAGTCTTGGTGTTTCAACTAGAGTTGGAAACTTGTTAGGTGAGAATTCTCCTTCAAAAGCACGTTTCTCTATGATAGTGTCCATGTTTTGTGGCTTTGGTTTGGGAATTTTGGCTATGGTTTTTACTATTTTGATGAGAAATCAATGGGGGAGATTGTTTACAAACGATGAAGAGATTCTTAATCTAACGGCTATGGTTTTGCCAATTGTTGGGCTTTGTGAGATTGGAAATTGTCCACAAACAACAGGGTGTGGTGTTTTGAGGGGAAGTGCTAGGCCTACGGTGGGTGCAAATATCAATTTGGGTTCTTTCTATTTAGTGGGTATGCCCGTGGGTATTTTTCTTGGGTTTGTTGTGAAAATGGGCTTTGTTGGGCTTTGGTTTGGGTTGCTTGCGGCCCAAGGCTCCTGTGCTGTTCTCATGTTGTTTGTTCTTTGTAGAACGGATTGGAATAATCAAGTTGAAAGAGCTAAGAATCTCACAAAAACTACTATTTCTGATTCTGATTCTACGTTGTTACCAACATTCATCACAAAAAATGTACTGTCTCATGAAGACAAGAACATCAACAGTCACTGTGGTTGTCTTGAAGAAACCATAGTAATCATAAACCATGATGACGACGAAGACGAAGACGACGATGATTATGTTCCCAAGACATGTACACACTCACTTGAAACAGACCCACTACTACCAAACATGTTAACACTAAGTTGA 1557 0.3924 MKAIGKISVPTAITGLLLYSRAMISMLFLGYLGETQLAGGSLSIGFANITGYSIISGLAMGMEPICGQAYGAKQWKILGLTLQKTTLLLLSTSIPISYLWLNMKNILLLCGQDQEISSTAQTFILFSLPDLFFLSFLHPLRIYLRTQNITLPLTYCSAVSVILHVPLNFVLVVYFKMGVAGVAIAMIWFNLNLLIFLSSFVFFSGVYKDSWVFPSMECLQGWSSLLKLSIPSCVSVCLEWWWYELMIILCGLLVNPKSTISSMGILIQTTSLVYVFPSSLSLGVSTRVGNLLGENSPSKARFSMIVSMFCGFGLGILAMVFTILMRNQWGRLFTNDEEILNLTAMVLPIVGLCEIGNCPQTTGCGVLRGSARPTVGANINLGSFYLVGMPVGIFLGFVVKMGFVGLWFGLLAAQGSCAVLMLFVLCRTDWNNQVERAKNLTKTTISDSDSTLLPTFITKNVLSHEDKNINSHCGCLEETIVIINHDDDEDEDDDDYVPKTCTHSLETDPLLPNMLTLS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0426 518 PANTHER MULTIDRUG RESISTANCE PROTEIN 2 454 - -
Psa5g0426 518 Pfam MatE 231 392 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g0426 518 Pfam MatE 10 170 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g0426 518 TIGRFAM matE: MATE efflux family protein 16 407 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Psa5g0426 518 CDD MATE_eukaryotic 1 436 IPR045069 GO:0042910|GO:1990961
Psa5g0426 518 PANTHER PROTEIN DETOXIFICATION 2 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0426 Psa-Chr5 35142756 35145408 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0426 K03327 - rcu:8288072 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0426 5 35142756 35145408 Psa5g0426 5 35142756 35145408 ECH