Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0423 ATGGCGTCGATTCGACGGACGCTATCTCCGGCTTATCACGACCGTCATCACTACATAAACACCGTCTTTTCGTCTTCCTCTCCGTCACACAAACTTCCTTCTTCAAACGCTAATTACTCTGCACTAGCTTCGTCGTTTCAGAAATTAATCGGTAGCGTTTTCATGCGACGCTACAATCGGAAGGGGCAATGGCGAAGAATTGCTTACAGGTGCGTGCTTTTTTTCTTCGCCGGGATTTTGTTAGGAATTTTCCCTTTTGGTAATCTCGTTCATGATATTCCTCATCAACGTAACGAGAAAATTAATTTCGATATCAAGACTCCTCACGCCGACGACGCTCAGTTAGTTCTCGATGATCGTGTTCCGGGAAAGCGCGGCGGCGGCAGTGGTGGCGGAGGAGGTGGTAGCGGTGGTGGTGAAGATACCGGTTTTGTGATTGATCCTGTGAGTTTGAGCTTGAGGATGAATGATGAGAAGGTGAAGGTGAAAGTGAAAGCGAGGGATTTGGTTGAATCTGAGAGGATTGATTTTGTGACGAGGAAGCAATTGATTGTGGTGACTCCGACTTATAATCGGGCTTTTCAGTCGTATTTTTTGAATAGGTTAGGGCAGGTTTTGCGATTGGTGCCGCCGCCGGTTTTATGGGTGGTGGTGGAAATGAATTCTGCTTCTATGGAGACTGCTGAGTTGTTGAGGAAAACGGGTGTGATGTATAGGCATTTGGTGTGTGGTAAGAATTCAACTGATTTGAAGGATAGAGGGGTTCATCAGAGGAATACAGCGTTGGAGCATATTGAACATCATAGACTTGATGGGATTGTTTATTTTGCTGATGATGATAATGTATATTCTCTTGAGTTGTTTCAGGCAATTAGAGATATCAGTCGTTTTGGCACTTGGCCTCTCGCCATGCTTGCACCAAGCAAAAACAAGGCTATTTTGGAGGGTCCGGTATGCAATGGAAGCCAAGTGATTGGGTGGCATACAAATGAGAAAAGTAAAAGACTTCGTAGATTTCATGTTGATATGTCTGGATTTGCATTCAACAGCTCAATCATGTGGGATCCCAAGCGGTGGCGACGCCCTACTTCAAAGCCTATACGGCAATTAGACTCAGTGAAGGAGGGTTTTCAGGAGACCACCTTTATAGAACAATTGGTAGAAGATGAGAGGCAAATGGAAGGTTTGTCTGCTGGTTGTAAGAAAATAATGAATTGGCATCTCCATTTGGATGTTCATAATGTAGTTTATCCAAAGGGTTGGATGCTTGAGAAAAACCTAGATGCTGTCATTCCCATCAAGTAA 1305 0.4437 MASIRRTLSPAYHDRHHYINTVFSSSSPSHKLPSSNANYSALASSFQKLIGSVFMRRYNRKGQWRRIAYRCVLFFFAGILLGIFPFGNLVHDIPHQRNEKINFDIKTPHADDAQLVLDDRVPGKRGGGSGGGGGGSGGGEDTGFVIDPVSLSLRMNDEKVKVKVKARDLVESERIDFVTRKQLIVVTPTYNRAFQSYFLNRLGQVLRLVPPPVLWVVVEMNSASMETAELLRKTGVMYRHLVCGKNSTDLKDRGVHQRNTALEHIEHHRLDGIVYFADDDNVYSLELFQAIRDISRFGTWPLAMLAPSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSSIMWDPKRWRRPTSKPIRQLDSVKEGFQETTFIEQLVEDERQMEGLSAGCKKIMNWHLHLDVHNVVYPKGWMLEKNLDAVIPIK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0423 434 Pfam Glycosyltransferase family 43 202 410 IPR005027 GO:0015018|GO:0016020
Psa5g0423 434 SUPERFAMILY Nucleotide-diphospho-sugar transferases 182 427 IPR029044 -
Psa5g0423 434 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 110 IPR005027 GO:0015018|GO:0016020
Psa5g0423 434 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 174 431 IPR005027 GO:0015018|GO:0016020
Psa5g0423 434 CDD GlcAT-I 183 411 IPR005027 GO:0015018|GO:0016020
Psa5g0423 434 PANTHER GLYCOSYLTRANSFERASES 174 431 - -
Psa5g0423 434 PANTHER GLYCOSYLTRANSFERASES 1 110 - -
Psa5g0423 434 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 181 425 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0423 Psa-Chr5 34611345 34615076 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa5g0423 1 434 Glycosyltransferase AT1G27600 57.175 3.08e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0423 K20869 - gmx:100809892 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0423 5 34611345 34615076 Psa5g0423 5 34611345 34615076 ECH