Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0422 ATGGCCGCACCTCCCACCAAGGACCAAGTCCTCTCTCTCCTCGCCGCTGCTAATAACCACGGCGACGTCTCCGTCAAAACCACTTCCCTAAAACAAGCCAAAGACCTTCTTCTTTCCATCGACCCCTCTCTCGCCGCTGACCTTTTTCCTTATCTCCTCGACCTTCAGTCTTCTCACGAAAGCCTCGTCCGCAAATTGCTCATACAGATAATTGAGGAGATTGGTTTTAGAGCAGCTGAACATTCTCCTACGCTGATATCTTCACTGTTAACACTTCTACGAGATAGCGATGTAACTGTTGTGAAGCAGTCTATTATTAGTGGCATCAATTTATTCTGTAGTTGTTTTGAGGAGATGATTTTGCAGTTTCAGCAACGTGGTAAAGTTGAGAGGTGGTTAGAAGAGATTTGGATGTGGATGCTTAAGTTCAAGGAGGCTGTTTTTGAGATTGCTTTGGAGGGTGGGTCTATTGGAATAAAGTTGTTGGCACTGAAATTCTTGGAGATTTTTGTATTACTTTTTACATCTGACATCAGTTATCCTGAAAAATCAGCCACTCAAGGAGTAAGCCAAGCTGTTAATATCTCATGGTTGGTGGATTCTCACCCTGTTCTCGATCCAACGGTGCTTATGACAGAGGCAAATAGGACACTTGGCATTTTATTTAAATTGTTGCAGTGTGCTGGCAATCTCCCTGGTTGCTTGACAATTACTGTCGTGAATTGTTTAGCAGCCATTGCAAGGAAAAGACCACAACACTATGGTACTATCCTCTCAGCTCTGCTTGATTTTGATCCAAATGTTCAAACAGTAAAAGGATGTCATCTTGTCAGTATTCAGTACTCTTTAAGAACAGCTTTTTTGGGTTTTCTAAGATGCACTTATTCTCCAATAATAGAGTCAAGAGAACGACTGATAAGGAGCCTGCGAGCTATGAGTGCAGGGGATGCTGCTGATCAGGTGATTCGGCAAGTAGACAAAATGATTAAAAGCGGTGATCGCTTTGCCCGTGATGCTCGAGTTGGCAAGGATAACCAACCATCAACTCAGTTGCCAGTTTCTGGGGAATTATCTAGGAAAAGACCAGTTCCTCATGATAATGAACAATTGGCCAATGGTCACGAGGCCATTGCTAAGCGGATTCGTTCTGGTCCTGACTCTGACTTTACTTCACCTGCTCAAATAAATGATTCTGGGCGAGATCTTAGCTCCATTAATGGAGTGTCACCTAATGTCCCTGTTCTAGAAAACGAACTAACTGCCGTGGAACAAATGATTGCCGTTATTGGTGCTTTGATTGCTGAAGGAGAAAGAGGCGCCAAATCTCTTGAAATACTTATTTCACAGATTCATCCTGATCTGTTGGCTGATATTGTCATAGCTAATATGAAGCACTTGCCTAAGACACCACCAACACTAGCAAGGTTTGAGAACCCATCAGTAACTCGACCAGTAGGTTCCCAAGTCAGTCAATCGCAGGTTATAATAGCATCTGCTTCAACAAGTTCTGTCCAATCCTTGGCTGTTTCTGCCGAAGCACAATTCCCTTCAACTACTGCCATTTCTTCTGCCACTACCTCATCACCATCCGAGACATCTAATTTTAGCAACCTTCCTGCCGATTCTAAACGTGATCCACGCCGGGATCCCCGTCGTTTGGATCCGCGGCGTGGAGCAATAACTCCTGGAGGAGCAGCTATCTCAGTTACAGATGATACCAGGGCCACAGAATTGGAATCTGAGGATCCTGTATCTATTATTAAACATGCTTCACATCATGTTTCAAGTACTGATGACGATACCCAATCAAATTTAACAATTAAAGTAAAAATTGAAGATAGGAACTCCGAAAGCCCTCCAGTTCTAGGATCTGATCGGGTTAGTCCCAAAACAGAGGCTCTTGAAGGGCCTGGAGAACACCAGATTATGGAAGCAAATGCTTCTTTGAATCCCGGAGTCTCTTCCACTGATTCAAGAGACGAAGCTCTGAGTGCAGTAAATCTTTTGGATGATACTGAAACAAATGGGACAGATTCATCATCTATTTTAGAGCTTGATCAGTTTTCTCTTGATGTTCAAGTGTCACCCAAATCGGAAGATACATGTCTGGAGTTGCCACAGCTTCCACCTTACATTCAACTATCCCAAGAACAGGAAAGTAAGGTGAAACACATGGCCATTAGCCATATAATTGAGTCATACAAACATTTGCACGGGGAAGATAGTCAGCAATTTTGCATGCCACTACTTGCTAGACTTGTAGCTCAGATTGATAACGATAGTGTGATCACTGTGATGCTGCAAAAACACATTCTGGAAGACCACTGGCGAAAGGGGAATGAGCTTGTTCTGCATGTTTTGTATCATCTTCACTCCTCGATGATATTGGATTCAGCTGGAAACTCTTCATCTTTTGCTGTTTTATATGATAACTTTCTCTTAGGAGTGGCCCAAACTCTGTTGGACTCTTTTCCAGCTTCAGATAAGTCTTTTAGCAGACTTCTTGGTGAAGTTCCATTTCTGCCTGAATCTGCTTTGAAGATTTTGGAGGATCTATGCTATTCTGATGTTATTGATCATGATGGAAAAATTATCCGTGATATTGAGCGTGTAACTCAAGGCCTTGGTGCTATCTGGAGTTTAATTTTGGGCCGTCCACAAAACCGTCAAAGCTGCTTAGCAATAGCGTTGAAGTGTGCTGTTCACCCACAGGACGAGATTCGAGCTAAAGCTATTCGGCTGGTGACAAACAAGCTCTTTCAGCTTAGTTACATAGCAGAAGATGTTGTGAAATTTGCAACAAAAATGCTTCTCTCTGCTGTAGATCATGAAGTTTCAATTGGAGTACAATCTGGACCTACCGAACAAAGAACGGAGGTCGAAAATCTTGAAATAAGTAGTACTTCCCAGGTTTCGGAGCCTGAAAATGACCCCACTAGAGTTGCTAAACCAACTATTCAAAGTGTTTCATCTATATCATTTTCTGAAGCACAACGCCTGATTTCTTTATTTTTTGCTCTATGTACAAAGAAACCCAGTCTTCTACAGATTGTATTTGATAATTATGGGCAAGCCTCAAGAATTGTAAAGCAGGCTTTTCATCGCCACATTCCTAATCTTGTGAGAGCCCTCGGGCAATCTTATTCTGAATTGCTCCATATCATATCTGATCCACCAAAAGGAAGTGAAAATCTTCTGACACTGGTGCTGCAAATATTGACTCAAGACACAACACCATCTTCTGATTTGATATCTACAGTTAAACATTTATATCAAACAAAACTTAGAGATGTCACAATTCTTGTTCCGCTATTGTCATCGCTCACCAAAACAGAGGTTTTACCAATTTTCCCACAGCTTGTTGACCTTCCATTGGAAAAGTTTCAAAGGGCACTTGCTCACATACTACAGGGTTCAGCTCATACAGGCCCAGCTTTAACACCTGTAGAAGTGTTGGTTGCAATCCATGGAATTGTTCCTGAGAAAGATGGTCTTGCACTTAAAAAGATAACAGATGCTTGCTCGGCTTGTTTTGAACAACGGACAGTGTTCACTCAGCAGGTTCTGGCCAAGGCATTGAATCAGATGGTTGATCAAACACCGTTGCCCCTGCTTTTTATGAGAACAGTTATTCAAGCCGTTGATGCTTTCCCTGCTTTGGTTGATTTTGTTATGGAGATACTCTCAAAGCTTGTGACCAAACAGGTGTGGCGTATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACGCAGCCGCGTTCTTTTCATGTATTGTTGCAGTTGCCACCTCAACAACTGGAAAGTGCACTCAACAGACATGCTAATCTCAGAGGGCCCCTTGCTTCTTATGCCAACCAATCATCCGTAAAATCTTCAATTAGTAGATCAACTTTAGTTGTTCTTGGTCTTGCAAATGAAACACATGTGCAGCAACATTTATCAGCATCATTGCACCATTCTGAGAAGGGTGCTTCAGTTAGTGGGGCAACTCTGACATAA 4008 0.4234 MAAPPTKDQVLSLLAAANNHGDVSVKTTSLKQAKDLLLSIDPSLAADLFPYLLDLQSSHESLVRKLLIQIIEEIGFRAAEHSPTLISSLLTLLRDSDVTVVKQSIISGINLFCSCFEEMILQFQQRGKVERWLEEIWMWMLKFKEAVFEIALEGGSIGIKLLALKFLEIFVLLFTSDISYPEKSATQGVSQAVNISWLVDSHPVLDPTVLMTEANRTLGILFKLLQCAGNLPGCLTITVVNCLAAIARKRPQHYGTILSALLDFDPNVQTVKGCHLVSIQYSLRTAFLGFLRCTYSPIIESRERLIRSLRAMSAGDAADQVIRQVDKMIKSGDRFARDARVGKDNQPSTQLPVSGELSRKRPVPHDNEQLANGHEAIAKRIRSGPDSDFTSPAQINDSGRDLSSINGVSPNVPVLENELTAVEQMIAVIGALIAEGERGAKSLEILISQIHPDLLADIVIANMKHLPKTPPTLARFENPSVTRPVGSQVSQSQVIIASASTSSVQSLAVSAEAQFPSTTAISSATTSSPSETSNFSNLPADSKRDPRRDPRRLDPRRGAITPGGAAISVTDDTRATELESEDPVSIIKHASHHVSSTDDDTQSNLTIKVKIEDRNSESPPVLGSDRVSPKTEALEGPGEHQIMEANASLNPGVSSTDSRDEALSAVNLLDDTETNGTDSSSILELDQFSLDVQVSPKSEDTCLELPQLPPYIQLSQEQESKVKHMAISHIIESYKHLHGEDSQQFCMPLLARLVAQIDNDSVITVMLQKHILEDHWRKGNELVLHVLYHLHSSMILDSAGNSSSFAVLYDNFLLGVAQTLLDSFPASDKSFSRLLGEVPFLPESALKILEDLCYSDVIDHDGKIIRDIERVTQGLGAIWSLILGRPQNRQSCLAIALKCAVHPQDEIRAKAIRLVTNKLFQLSYIAEDVVKFATKMLLSAVDHEVSIGVQSGPTEQRTEVENLEISSTSQVSEPENDPTRVAKPTIQSVSSISFSEAQRLISLFFALCTKKPSLLQIVFDNYGQASRIVKQAFHRHIPNLVRALGQSYSELLHIISDPPKGSENLLTLVLQILTQDTTPSSDLISTVKHLYQTKLRDVTILVPLLSSLTKTEVLPIFPQLVDLPLEKFQRALAHILQGSAHTGPALTPVEVLVAIHGIVPEKDGLALKKITDACSACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPALVDFVMEILSKLVTKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPQQLESALNRHANLRGPLASYANQSSVKSSISRSTLVVLGLANETHVQQHLSASLHHSEKGASVSGATLT* 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0422 1335 MobiDBLite consensus disorder prediction 520 580 - -
Psa5g0422 1335 Pfam Symplekin tight junction protein C terminal 1097 1275 IPR022075 -
Psa5g0422 1335 SUPERFAMILY ARM repeat 8 1098 IPR016024 -
Psa5g0422 1335 MobiDBLite consensus disorder prediction 339 371 - -
Psa5g0422 1335 Pfam Symplekin/PTA1 N-terminal 97 319 IPR032460 -
Psa5g0422 1335 Gene3D - 2 341 IPR011989 -
Psa5g0422 1335 MobiDBLite consensus disorder prediction 520 540 - -
Psa5g0422 1335 PANTHER SYMPLEKIN-RELATED 18 1335 - -
Psa5g0422 1335 PANTHER SYMPLEKIN-RELATED 18 1335 - -
Psa5g0422 1335 MobiDBLite consensus disorder prediction 951 981 - -
Psa5g0422 1335 MobiDBLite consensus disorder prediction 541 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0422 Psa-Chr5 34552125 34573328 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0422 K06100 - gmx:100789876 1984.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0422 5 34552125 34573328 Psa5g0422 5 34552125 34573328 ECH