Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0407 ATGGCCGCTGATGCACCTTGCTGTGAAACCAAATTCTGGCTCTACATACTTCTCATCATTGGATTGGTTTGCTTCGCTGGTCTCATGGCTGGTCTCACCCTTGGACTCATGTCTTTGGGACTCGTCGACCTCGAAGTTCTCATCAAATCTGGTCGTCCTCAACATCGTATCCATGCCGCTAAGATATTCCCTGTGGTTAAGAATCAGCATCTTTTGCTTTGTACTCTTTTGATTGGAAATTCTTTAGCCATGGAGACTCTTCCGATTTTTCTTGATGCTATTGTGCCTCCTTATGCTGCTGTTTTGATTTCGGTTACTCTAATCCTCATCTTTGGAGAGATATTGCCGCAAGCAATTTGTACGCGATATGGATTGATGGTTGGCGCAACGCTTGCCCCGCTTGTTCGTGTTCTTCTTGTAGTATTTTATCCCATCGCTTATCCCATCAGCAAGGTGCTTGATTGGATGTTAGGTAAAGGAAAAGCTGCTCTTTTAAAGAGGGCAGAGCTCAAGACCTTTGTGAATTTCCATGGGAATGAGGCTGGAAAAGGAGGAGATTTAACGCACGATGAGACAACCATCATAGCCGGAGCGCTTGAATTGACTGAAAAGACCGCAAAAGATGCCATGACTCCCATATCAAAGGCATTTTCCCTTGATTTGGATGCAACTTAA 675 0.4459 MAADAPCCETKFWLYILLIIGLVCFAGLMAGLTLGLMSLGLVDLEVLIKSGRPQHRIHAAKIFPVVKNQHLLLCTLLIGNSLAMETLPIFLDAIVPPYAAVLISVTLILIFGEILPQAICTRYGLMVGATLAPLVRVLLVVFYPIAYPISKVLDWMLGKGKAALLKRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDAT* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0407 224 Gene3D - 189 224 IPR046342 -
Psa5g0407 224 Pfam Cyclin M transmembrane N-terminal domain 17 190 IPR002550 -
Psa5g0407 224 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Psa5g0407 224 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 223 - -
Psa5g0407 224 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 223 IPR045095 GO:0010960
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0407 Psa-Chr5 32864514 32865881 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0407 K16302 - gmx:100804572 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0407 5 32864514 32865881 Psa5g0407 5 32864514 32865881 ECH