Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa5g0403 ATGCGAATTCCTAAGAGGCTCTTCTCATTTTCTCTCTCTAACTTCTCTCCTCATCTAGTTGCGCCTCTTTTATCTTCGCGGATTTGCTTTGCGTTTGGAATTTGCGGTAAACCTTGTCGTAGCTTCGTCAACGTCGCATCACCAGGTGCTAGCAAGTTGCATTCTCAATATTCAATGGATGAGAACCACGATGTTGGTATGCATGACTCAAAGTCAATTGGCAGGGGTACGGAAAAGCAGCCACGTGTATGGTCATCTTCTCCTGAAAATGGGTCTAGAACTGATATAGGCAAACAGATATTTTGTAACCGGTCACTGAATATGAAGAACATTGTTGCTGTGGGATTTGACATGGATTATACTCTGGCACAATACAAGCCTGAAACTTTTGAGTCTCTTGCTTATCAAGGCACAATTAAAAAGCTGGTTTATGATTTGGGATATCCTAGCGAGTTACTAAATTGGTCTTTTAACTGGAAGTACATGGTCAGGGGCTTGGTTCTTGACAAAAAAAGAGGAAATATATTGAAGATGGATCGCCACAAATATGTGAAAGTAGCCTATCATGGATTTAAAGAATTGTCAAAAGAAGATAAAGTTGGGACCTATGGGAATACTTTAGTACGCGATTCATTTGACGAGCCAGACTATGCTCTAATTGATACACTTTTTTCTCTTGCGGAAGCTTACTTGTTTGCTCAACTGGTTGATTTTAAGGACTCTAATCCCGGAAATATTCGAGAGGGCGTTGATTATGCTCGCATGTATAAAGATGTTCGAGCTGCTGTTGATTTGTGCCACCGTGATGGGACATTGAAGCAAATGGTTGCTAAAGATCCTGGAAGGTATATCAATGAAGACACCATGATAGTGCCCATGCTTGAAATGCTCAGAGAATCTGGACGTGCAACATTTTTAGTGACAAATAGTTTATGGGACTATACAAATACTGTCATGAATTTCCTCTGTGGATCCAGAATTGTAGATGGCAGTAATAATTTTGAATGGCTTCAATACTTTGATGTGGTTATCACTGGCAGTGCAAAGCCAGGATTTTTTCACGAGGAAAATCGTGCCAACCTATTTGAGGTTGTGCCTGAGACTGGAATGCTTCTGAATACAGATAATGGCTCTCCTATGCCTCAGGTGGGGAACATCTCGGCAAGGATATTTACAGAAGCAAAGAATCACGCTTGCCAAGCTTTCCAGGGAGGCAATGTCGCTCATCTGCATAAACTGCTTTCCATTGAATCAAGTTCACAGGTTCTGTATGTTGGGGATCACATTTATGGAGACATACTACGTAGCAAAAAGGTTCTTGGATGGAGAACAATGCTTGTAATCCCAGAGCTGGAGAAGGAAGTTAAACTCCTCTGGGAGTCACGGGACACACGAAAGGAGCTTCAGTTCTTGAGGAGTGAGCGTGATCGCATTGAGGATGAAGTACATCATTTGAAGTGGTCTCTCAGATTCAAGAACCCAGATGCTGTTGCCAAGCAAAAGTTATCTTCAGCACTTGATAAATTGGAGCTTGAAAGAGAGAGAATGCGATTAATTCATCAAGAAGCTCAAAGAAAATTACATCTAGGGTTTCACGAACCATGGGGACAGCTTATGAAAACTGGTTATCAGAATTCTCGCTTTGCTCATCAGGTTGAGAGATTTGCCTGCCTTTATACTAGCCAAGTATCTAACCTGGCGTTGCACTCTCCAGACAAGTATTACAGACCCAGTGAAGATTTTATGCAGCATGAATTTGGTATTCTCGGTTCTGCGCCACGAGAAACGTAA 1791 0.4176 MRIPKRLFSFSLSNFSPHLVAPLLSSRICFAFGICGKPCRSFVNVASPGASKLHSQYSMDENHDVGMHDSKSIGRGTEKQPRVWSSSPENGSRTDIGKQIFCNRSLNMKNIVAVGFDMDYTLAQYKPETFESLAYQGTIKKLVYDLGYPSELLNWSFNWKYMVRGLVLDKKRGNILKMDRHKYVKVAYHGFKELSKEDKVGTYGNTLVRDSFDEPDYALIDTLFSLAEAYLFAQLVDFKDSNPGNIREGVDYARMYKDVRAAVDLCHRDGTLKQMVAKDPGRYINEDTMIVPMLEMLRESGRATFLVTNSLWDYTNTVMNFLCGSRIVDGSNNFEWLQYFDVVITGSAKPGFFHEENRANLFEVVPETGMLLNTDNGSPMPQVGNISARIFTEAKNHACQAFQGGNVAHLHKLLSIESSSQVLYVGDHIYGDILRSKKVLGWRTMLVIPELEKEVKLLWESRDTRKELQFLRSERDRIEDEVHHLKWSLRFKNPDAVAKQKLSSALDKLELERERMRLIHQEAQRKLHLGFHEPWGQLMKTGYQNSRFAHQVERFACLYTSQVSNLALHSPDKYYRPSEDFMQHEFGILGSAPRET* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa5g0403 596 Coils Coil 499 526 - -
Psa5g0403 596 Gene3D - 260 477 IPR023214 -
Psa5g0403 596 Gene3D - 96 146 IPR023214 -
Psa5g0403 596 MobiDBLite consensus disorder prediction 71 91 - -
Psa5g0403 596 CDD HAD_cN-II 101 561 - -
Psa5g0403 596 SUPERFAMILY HAD-like 98 587 IPR036412 -
Psa5g0403 596 TIGRFAM HAD-IG-Ncltidse: HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase 100 468 IPR008380 -
Psa5g0403 596 Coils Coil 461 481 - -
Psa5g0403 596 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 41 591 IPR008380 -
Psa5g0403 596 PANTHER CYTOSOLIC PURINE 5-NUCLEOTIDASE 41 591 - -
Psa5g0403 596 Pfam 5' nucleotidase family 100 586 IPR008380 -
Psa5g0403 596 PIRSF NT5C2 74 595 IPR016695 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa5g0403 Psa-Chr5 32721510 32728951 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa5g0403 - - mtr:MTR_3g111870 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa5g0403 5 32721510 32728951 Psa5g0403 5 32721510 32728951 ECH